BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028138
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana] g...    65   6e-09
ref|XP_002894068.1| hypothetical protein ARALYDRAFT_891571 [Arab...    60   2e-07
ref|NP_175501.1| putative F-box protein [Arabidopsis thaliana] g...    59   3e-07
ref|XP_002888154.1| hypothetical protein ARALYDRAFT_893536 [Arab...    56   3e-06
ref|XP_002887926.1| hypothetical protein ARALYDRAFT_315031 [Arab...    56   3e-06

>ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana]
           gi|75263267|sp|Q9FZF8.1|FB44_ARATH RecName:
           Full=Putative F-box protein At1g47790
           gi|9802587|gb|AAF99789.1|AC012463_6 T2E6.11 [Arabidopsis
           thaliana] gi|332194093|gb|AEE32214.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 389

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
 Frame = -3

Query: 376 MEKAESKEMKVREERSVDM--FSKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSK 203
           ME+ E K+ KV   R +     S  PL++ + ILLRLP KSV + RCVSK W +I+TD  
Sbjct: 1   MEQQEKKKRKVYRRRRLQSKPTSSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPY 60

Query: 202 FLKMQLTQLSNIESDVFFYYRNSNNETALTYIEETDENTFSKNPIKPFKV 53
           F+K   TQ S  +S +F + ++             D N+ S+  I  F+V
Sbjct: 61  FIKTYETQSSTRQSLLFCFKQSDKLFVFSIPKHHYDSNSSSQAAIDRFQV 110


>ref|XP_002894068.1| hypothetical protein ARALYDRAFT_891571 [Arabidopsis lyrata subsp.
           lyrata] gi|297339910|gb|EFH70327.1| hypothetical protein
           ARALYDRAFT_891571 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -3

Query: 376 MEKAESKEMKVREERSVDM--FSKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSK 203
           ME+ + K+ KV  +R       S  PL++T  ILLRLP +SV + RCVSK W +I TDS 
Sbjct: 1   MEQPKEKKRKVNRKRRTQSKSTSSFPLDLTTEILLRLPARSVLRFRCVSKLWSSITTDSY 60

Query: 202 FLKMQLTQLSNIESDVFFYYRNSN 131
           F+K   T+ S +   +   ++  +
Sbjct: 61  FIKSFETRFSTLRPSLLVCFKEGD 84


>ref|NP_175501.1| putative F-box protein [Arabidopsis thaliana]
           gi|75268202|sp|Q9C6J2.1|FB53_ARATH RecName:
           Full=Putative F-box protein At1g50880
           gi|12321808|gb|AAG50950.1|AC079284_25 hypothetical
           protein [Arabidopsis thaliana]
           gi|332194476|gb|AEE32597.1| putative F-box protein
           [Arabidopsis thaliana]
          Length = 279

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
 Frame = -3

Query: 376 MEKAESKEMKVREERSVDM--FSKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSK 203
           ME+ E K+ K++   S      S +PL+VT+ IL +LP KSV + RCVSK+W +I TD  
Sbjct: 1   MEQQEKKKRKIQRSISTQSSSMSSIPLDVTSKILAKLPAKSVLRARCVSKQWSSISTDPY 60

Query: 202 FLKMQLTQLSNIESDVFF 149
           F+     + S+    +FF
Sbjct: 61  FISNMFPKQSSSSLLIFF 78


>ref|XP_002888154.1| hypothetical protein ARALYDRAFT_893536 [Arabidopsis lyrata subsp.
           lyrata] gi|297333995|gb|EFH64413.1| hypothetical protein
           ARALYDRAFT_893536 [Arabidopsis lyrata subsp. lyrata]
          Length = 404

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = -3

Query: 382 RTMEKAESKEMKV--REERSVDMFS-KLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILT 212
           R  E+AE KE+ +  +E+ S   F   +PL++ + ILLRLP KSVAK RCVSK W +I T
Sbjct: 3   RREEEAEDKEISIQSKEDESCRKFLVMIPLDLIHEILLRLPAKSVAKFRCVSKLWSSITT 62

Query: 211 DSKFLKMQLTQLS 173
              F++  ++Q S
Sbjct: 63  RPDFIRSFVSQSS 75


>ref|XP_002887926.1| hypothetical protein ARALYDRAFT_315031 [Arabidopsis lyrata subsp.
           lyrata] gi|297333767|gb|EFH64185.1| hypothetical protein
           ARALYDRAFT_315031 [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
 Frame = -3

Query: 376 MEKAESKEMKVREER---SVDM---FSKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNIL 215
           ME+ E K ++V + R   S  M   +S  PL++ + ILL+LP KS+ + RC+SK W +I 
Sbjct: 1   MEQQEEKRLEVYKRRRGQSSSMSKPYSSFPLDLASEILLKLPAKSIVRSRCISKLWSSIT 60

Query: 214 TDSKFLKMQLTQLSNIESDVFFYYR 140
           TD  F+K   T+  +  S + F+ R
Sbjct: 61  TDPYFIKSFETRSLSKPSLLLFFKR 85