BLASTX nr result

ID: Coptis23_contig00028133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028133
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280115.2| PREDICTED: uncharacterized protein LOC100254...   285   1e-74
ref|XP_002322260.1| predicted protein [Populus trichocarpa] gi|2...   262   1e-67
ref|XP_002511179.1| conserved hypothetical protein [Ricinus comm...   261   2e-67
ref|XP_003522435.1| PREDICTED: uncharacterized protein LOC100787...   243   5e-62
ref|XP_003525535.1| PREDICTED: uncharacterized protein LOC100792...   243   7e-62

>ref|XP_002280115.2| PREDICTED: uncharacterized protein LOC100254191 [Vitis vinifera]
          Length = 326

 Score =  285 bits (730), Expect = 1e-74
 Identities = 138/236 (58%), Positives = 176/236 (74%), Gaps = 2/236 (0%)
 Frame = -3

Query: 708 CSSKSP-CTNLPSDIPHSLMHQDTSSSVAD-LTKKELQLLRNIISKRSPCKLLVFGLPPE 535
           CSS SP C   P   P +   Q  +S+ A  LT+KE QLL N+IS R+PC LL+FGL P+
Sbjct: 91  CSSASPTCRKTPLRAPGARRSQHNNSANATALTEKEFQLLSNLISHRAPCNLLIFGLEPQ 150

Query: 534 YLFLSSLNTNGTTIFLDDNPENLKTIRTNNAGTQIYKVKHHVAAKEAYNLLKQARVDPVC 355
           +L L+S+N  GTTI L+D+P  L T+R  +  T+IYKV+HH+ A EAY +LK AR DP C
Sbjct: 151 HLVLASMNAGGTTILLEDDPAKLSTVRRRSNNTRIYKVEHHIPAGEAYRVLKHAREDPAC 210

Query: 354 APQAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQRTDKPEEPGRMPAIYTAAMIARTG 175
           AP + PL  S+C+LAL +LP  VYELKWDV++VDG R D+ E PGRM AIYTA+MIAR G
Sbjct: 211 APHSKPLEESTCQLALTKLPQEVYELKWDVVVVDGPRGDRAEAPGRMAAIYTASMIARAG 270

Query: 174 NLTDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCSRTTIQ 7
           N+T+V+VHDVD+MIEKWF+ EFLC+ENL+SSKGKLW+ R+ G S+ST FC   T+Q
Sbjct: 271 NMTNVVVHDVDRMIEKWFSWEFLCDENLVSSKGKLWNFRLVGKSNSTRFCPSETVQ 326


>ref|XP_002322260.1| predicted protein [Populus trichocarpa] gi|222869256|gb|EEF06387.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  262 bits (669), Expect = 1e-67
 Identities = 129/237 (54%), Positives = 166/237 (70%), Gaps = 2/237 (0%)
 Frame = -3

Query: 708 CSSKSP-CTNLPSDIP-HSLMHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPE 535
           CS+ SP C   PS  P +    Q  ++    LTKKE +LL ++I +++PC LLVFG  P+
Sbjct: 77  CSTPSPACEKAPSHTPSNQTAQQKIAADEPSLTKKEFKLLSDLIKRKAPCNLLVFGAEPQ 136

Query: 534 YLFLSSLNTNGTTIFLDDNPENLKTIRTNNAGTQIYKVKHHVAAKEAYNLLKQARVDPVC 355
           YL LSS+N+ GTTI L+D+P+ +   R  +  TQIYK+ +   AK+AY LL+ AR  P C
Sbjct: 137 YLRLSSINSGGTTILLEDDPDKISAARAKSNTTQIYKIDYQTPAKKAYKLLEHARKSPAC 196

Query: 354 APQAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQRTDKPEEPGRMPAIYTAAMIARTG 175
           AP    L+ SSCKLALK LP  VYEL+W+V++VDG     PE PGRM AIYTA+MIAR G
Sbjct: 197 APNPEMLQNSSCKLALKNLPREVYELEWNVVVVDGPSGHSPEAPGRMGAIYTASMIARAG 256

Query: 174 NLTDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCSRTTIQI 4
           N TDVLVHDVD+ IEKWF+ EFLC+ENL++SKGKLW  RI+G S+S+ FCS   + I
Sbjct: 257 NTTDVLVHDVDRTIEKWFSWEFLCDENLVASKGKLWSFRISGKSNSSGFCSDHMVAI 313


>ref|XP_002511179.1| conserved hypothetical protein [Ricinus communis]
           gi|223550294|gb|EEF51781.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 328

 Score =  261 bits (667), Expect = 2e-67
 Identities = 128/229 (55%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
 Frame = -3

Query: 705 SSKSPCTNLPSDIPHSL-MHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYL 529
           SS + C+ + S+I  S    Q++S+S   LTKKE +LL N+I  ++PC LL+FGL  ++L
Sbjct: 93  SSSTKCSAVSSNISSSPPTQQNSSTSATILTKKEFKLLSNVIKHKAPCNLLIFGLSAQFL 152

Query: 528 FLSSLNTNGTTIFLDDNPENLKTIRTNNAGTQIYKVKHHVAAKEAYNLLKQARVDPVCAP 349
            LSS+N+ GTTIFL+D+P+ + +IR  +  T IYK  +HV AK+AYNLLK AR    CAP
Sbjct: 153 KLSSINSGGTTIFLEDDPDRISSIRAKSNSTLIYKFDYHVPAKKAYNLLKHARESQDCAP 212

Query: 348 QAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQRTDKPEEPGRMPAIYTAAMIARTGNL 169
            +G L+ S+CKLAL  LP  VY+ KWDV++VDG     PE PGRM AIYTA MIAR G+ 
Sbjct: 213 SSGRLQNSTCKLALTNLPGEVYQQKWDVVVVDGPSGHSPEAPGRMAAIYTAGMIARAGHT 272

Query: 168 TDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCS 22
           TDVLVHDVD+ IEKWF+ EFLC+ENL+SSKGKLW+ RIT   +S +FC+
Sbjct: 273 TDVLVHDVDRTIEKWFSWEFLCDENLVSSKGKLWNFRITSKPNSRTFCT 321


>ref|XP_003522435.1| PREDICTED: uncharacterized protein LOC100787566 [Glycine max]
          Length = 292

 Score =  243 bits (621), Expect = 5e-62
 Identities = 118/230 (51%), Positives = 168/230 (73%), Gaps = 2/230 (0%)
 Frame = -3

Query: 705 SSKSPCTNLPSDIPHSLMHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYLF 526
           S+ SP T   S  P S  H +++     LT+KE ++L N+++ +SPC LL+FG  P+YL 
Sbjct: 69  SAMSPPT--ASHAPESSKHPNST-----LTEKEFKVLSNLVALKSPCNLLIFGFQPQYLT 121

Query: 525 LSSLNTNGTTIFLDDNPENLKTIRTNNAGTQIYKVKHHVAAKEAYNLLKQARVDPVCAPQ 346
           LSS+N  G+TIFL D+ + +  + TN+  TQ Y++ ++V +K+A+NLLK AR +  CAP 
Sbjct: 122 LSSMNAPGSTIFLYDHDDMIAKVATNSNNTQTYQLGYNVPSKKAFNLLKHARQNQACAPS 181

Query: 345 AGP--LRFSSCKLALKQLPNSVYELKWDVILVDGQRTDKPEEPGRMPAIYTAAMIARTGN 172
                L+ S CK AL+ LP+ VYE KWD+I+VDG + D PE PGRM +IYTA+++AR GN
Sbjct: 182 YPTQLLQKSKCKFALRNLPSEVYEKKWDIIVVDGPKGDSPESPGRMDSIYTASVLARAGN 241

Query: 171 LTDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCS 22
           ++DV+VHD+D+MIEKWF+ EFLC ENL+ SKGKLWH RI+G+S+ST+FC+
Sbjct: 242 VSDVVVHDIDRMIEKWFSWEFLCHENLLCSKGKLWHFRISGHSNSTTFCT 291


>ref|XP_003525535.1| PREDICTED: uncharacterized protein LOC100792528 [Glycine max]
          Length = 292

 Score =  243 bits (620), Expect = 7e-62
 Identities = 129/279 (46%), Positives = 175/279 (62%), Gaps = 6/279 (2%)
 Frame = -3

Query: 843 MNITTKKL---LVVVLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKCSSK-SPCTNLP 676
           MN+T KKL   LV++L                                CS   S C    
Sbjct: 4   MNLTKKKLIPILVLILSVISILRLLSLNVKTLPFSARISVLSPAPQHNCSQPLSTCNKTA 63

Query: 675 SDIPHSLMHQ-DTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYLFLSSLNTNGT 499
           S  P S     +T +    LT+KE ++L ++I+ +SPC LL+FG  P+YL LSS+N  G+
Sbjct: 64  SHAPESSDQPINTPNITTTLTEKEFKVLSDLIALKSPCNLLIFGFQPQYLILSSMNAAGS 123

Query: 498 TIFLDDNPENLKTIRTNNAGTQIYKVKHHVAAKEAYNLLKQARVDPV-CAPQAGPLRFSS 322
           TIFLD++P+ +  +R  +  TQIYK+++++ AK  Y LLK AR++P  C P    L+ S 
Sbjct: 124 TIFLDEDPDKISKVRKISNNTQIYKLEYNMPAKAGYKLLKNARLNPATCVPNPRFLQKSK 183

Query: 321 CKLALKQLPNSVYELKWDVILVDGQRTDKPEEPGRMPAIYTAAMIARTGNLTDVLVHDVD 142
           CKLALK LP+ VYE KWDV++VDG   D PE PGRM +IYTA+++AR+GN +DV+VHDVD
Sbjct: 184 CKLALKNLPSQVYEKKWDVMVVDGPNGDSPESPGRMGSIYTASVLARSGNTSDVVVHDVD 243

Query: 141 KMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFC 25
           +MIEKWF+ EFLC+ NL+ SKGKLWH RI  +S+ST FC
Sbjct: 244 RMIEKWFSWEFLCDGNLLYSKGKLWHFRIKVHSNSTRFC 282


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