BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028121
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315793.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|1...   110   2e-22
ref|NP_172893.1| ssDNA-binding transcriptional regulator [Arabid...   109   2e-22
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra...   109   2e-22
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   109   3e-22

>ref|XP_002315793.1| predicted protein [Populus trichocarpa] gi|222864833|gb|EEF01964.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 57/59 (96%)
 Frame = -3

Query: 179 SDEGKVRKVLKAEPLPDGSGHFFNLSVQNKLLNVDESIYIPVSKAEFTVLVSAFNYILP 3
           S+EGKVRKVLK EPLPDGSGHFFNLSVQNK LN+DESIYIPV++AE+TVL+SAFNYILP
Sbjct: 96  SEEGKVRKVLKVEPLPDGSGHFFNLSVQNKALNIDESIYIPVTRAEYTVLISAFNYILP 154


>ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|118485247|gb|ABK94483.1|
           unknown [Populus trichocarpa]
           gi|222851421|gb|EEE88968.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 57/59 (96%)
 Frame = -3

Query: 179 SDEGKVRKVLKAEPLPDGSGHFFNLSVQNKLLNVDESIYIPVSKAEFTVLVSAFNYILP 3
           SDEGKVRK+LK EPLPDGSGHFFNLSVQNK+LN+DE+IYIPV+KAE+TVL SAFNYILP
Sbjct: 172 SDEGKVRKLLKVEPLPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILP 230


>ref|NP_172893.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
           gi|75191428|sp|Q9M9S3.1|WHY1_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY1,
           chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 1; AltName: Full=Protein WHIRLY
           1; Short=AtWHY1; Flags: Precursor
           gi|7262683|gb|AAF43941.1|AC012188_18 Contains similarity
           to a hypothetical protein from Arabidopsis thaliana
           gb|AC002521.2. EST gb|AI995686 comes from this gene
           [Arabidopsis thaliana]
           gi|12083312|gb|AAG48815.1|AF332452_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|13877787|gb|AAK43971.1|AF370156_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|16323418|gb|AAL15203.1| putative DNA-binding protein
           p24 [Arabidopsis thaliana] gi|332191039|gb|AEE29160.1|
           ssDNA-binding transcriptional regulator [Arabidopsis
           thaliana]
          Length = 263

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/59 (84%), Positives = 57/59 (96%)
 Frame = -3

Query: 179 SDEGKVRKVLKAEPLPDGSGHFFNLSVQNKLLNVDESIYIPVSKAEFTVLVSAFNYILP 3
           SDEGKVRKVLK EPLPDGSGHFFNLSVQNKL+NVDESIYIP+++AEF VL+SAFN++LP
Sbjct: 170 SDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLP 228


>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 264

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/59 (84%), Positives = 57/59 (96%)
 Frame = -3

Query: 179 SDEGKVRKVLKAEPLPDGSGHFFNLSVQNKLLNVDESIYIPVSKAEFTVLVSAFNYILP 3
           SDEGKVRKVLK EPLPDGSGHFFNLSVQNKL+NVDESIYIP+++AEF VL+SAFN++LP
Sbjct: 171 SDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLP 229


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = -3

Query: 179 SDEGKVRKVLKAEPLPDGSGHFFNLSVQNKLLNVDESIYIPVSKAEFTVLVSAFNYILP 3
           SDEGK+RKVLK EPLPDGSGHFFNLSVQNK +N+DESIYIPV+KAEF VL+SAFNYILP
Sbjct: 178 SDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESIYIPVTKAEFAVLISAFNYILP 236