BLASTX nr result

ID: Coptis23_contig00028111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028111
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631973.1| PREDICTED: protein FAM179B-like [Vitis vinif...   368   1e-99
ref|XP_002333428.1| predicted protein [Populus trichocarpa] gi|2...   360   4e-97
ref|XP_002332272.1| predicted protein [Populus trichocarpa] gi|2...   353   3e-95
ref|XP_002516924.1| clasp, putative [Ricinus communis] gi|223544...   344   3e-92
ref|XP_004164305.1| PREDICTED: protein FAM179B-like [Cucumis sat...   340   4e-91

>ref|XP_003631973.1| PREDICTED: protein FAM179B-like [Vitis vinifera]
           gi|297736855|emb|CBI26056.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  368 bits (945), Expect = 1e-99
 Identities = 189/302 (62%), Positives = 229/302 (75%), Gaps = 4/302 (1%)
 Frame = +2

Query: 38  MALRSLDNNLPTTPERPKKLAKVTTILP----ISTNDENKLPVPVSADPAIDYVFSEDLE 205
           MALRSLDN LPTTPERPKK AKV   +        NDENK P+P +AD  IDY+ SE+L+
Sbjct: 1   MALRSLDNALPTTPERPKKQAKVAVSIQKQSDFGVNDENKAPLPPTADATIDYISSENLK 60

Query: 206 AITDPEIKIQSLMEGLESKDWTKVCESLNDTRRFALYHSTLLLPTLDKVMVIIVKAMKNP 385
           A+ DPE +I  L EGL+SKDW KVCESLND RRFALYHS L+ P L+KV++++VKAMKNP
Sbjct: 61  AMPDPETQITGLTEGLDSKDWAKVCESLNDARRFALYHSALMAPILEKVLLVLVKAMKNP 120

Query: 386 RSALIKTSIMTASDIFKSYGHGLLESSTSEAFDXXXXXXXXKASQDKRFVCEEAEKSLLV 565
           RSAL KTSIM ++DIF ++G  LL+ + S+AFD        KASQDK+FVCEEA+K+L  
Sbjct: 121 RSALSKTSIMASTDIFNTFGDELLQPTNSDAFDHMLLQLLLKASQDKKFVCEEADKALKA 180

Query: 566 MVECMPSLALVSKLRVFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLVSLILIAAEL 745
           MV  M  L L+ KL+ +V+H N R+RAKAA+S +HCVSKMGL  MKEFGLVSL+ IAAEL
Sbjct: 181 MVGSMTPLPLLQKLQAYVNHANLRIRAKAAISISHCVSKMGLEGMKEFGLVSLVQIAAEL 240

Query: 746 LNDRLPEAREAARRTVASVYEAFTGDEDLKNLDLSAAESWQNFCASNLSPIQAQSLTKIT 925
           LNDRLPEAREAAR TV S+Y+AFT +E+ K       ESWQNFC SNL+P+ AQS+ KI 
Sbjct: 241 LNDRLPEAREAARSTVISIYDAFTENEEQKQ------ESWQNFCQSNLTPLHAQSMVKII 294

Query: 926 SS 931
           SS
Sbjct: 295 SS 296


>ref|XP_002333428.1| predicted protein [Populus trichocarpa] gi|222836622|gb|EEE75015.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  360 bits (924), Expect = 4e-97
 Identities = 187/303 (61%), Positives = 233/303 (76%), Gaps = 5/303 (1%)
 Frame = +2

Query: 38  MALRSLDNNLPTTPERPKKLAKVTTI-----LPISTNDENKLPVPVSADPAIDYVFSEDL 202
           MALR +DN+LP  PERPKK  KV ++       +  NDENK P+P S D  IDY+ S+DL
Sbjct: 1   MALRPIDNSLPVAPERPKKHVKVVSVPIQKQSEVGVNDENKAPLPPSTDSTIDYISSDDL 60

Query: 203 EAITDPEIKIQSLMEGLESKDWTKVCESLNDTRRFALYHSTLLLPTLDKVMVIIVKAMKN 382
           + I+DPE KIQ L+E L+SKDWTKVCESLN+ RRFALYHS+LLLP L+KVM ++VKAMKN
Sbjct: 61  KPISDPESKIQGLIERLDSKDWTKVCESLNNARRFALYHSSLLLPFLEKVMSVVVKAMKN 120

Query: 383 PRSALIKTSIMTASDIFKSYGHGLLESSTSEAFDXXXXXXXXKASQDKRFVCEEAEKSLL 562
           PRSALIKTSIM +SDIF ++G  LL+ STS+AFD        KASQDK+FVCEEA+++L 
Sbjct: 121 PRSALIKTSIMASSDIFYAFGDQLLD-STSDAFDSLLLQLLLKASQDKKFVCEEADRALN 179

Query: 563 VMVECMPSLALVSKLRVFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLVSLILIAAE 742
            +V+ M  L L++KL+++VSH N R+RAKAA+S ++ VSKM L  M EFGLVSL+ +AA+
Sbjct: 180 ALVKSMTPLPLLNKLKLYVSHVNLRIRAKAAISISNFVSKMELEGMNEFGLVSLVQVAAD 239

Query: 743 LLNDRLPEAREAARRTVASVYEAFTGDEDLKNLDLSAAESWQNFCASNLSPIQAQSLTKI 922
           LLNDRLPEAREAARRTV S+YEA+TG+E+ K       E WQNFC S+L PI AQS+ KI
Sbjct: 240 LLNDRLPEAREAARRTVISIYEAYTGNEEQKQ------EEWQNFCQSSLPPIHAQSIVKI 293

Query: 923 TSS 931
           TSS
Sbjct: 294 TSS 296


>ref|XP_002332272.1| predicted protein [Populus trichocarpa] gi|222832037|gb|EEE70514.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  353 bits (907), Expect = 3e-95
 Identities = 186/303 (61%), Positives = 232/303 (76%), Gaps = 5/303 (1%)
 Frame = +2

Query: 38  MALRSLDNNLPTTPERPKKLAKVTTI-----LPISTNDENKLPVPVSADPAIDYVFSEDL 202
           MALR +DN+LP  PERPKK  KV ++       +  NDENK P+P   D  IDY+ S+DL
Sbjct: 1   MALRPIDNSLPIAPERPKKHVKVVSVPIQKQSEVGVNDENKAPLP---DSTIDYISSDDL 57

Query: 203 EAITDPEIKIQSLMEGLESKDWTKVCESLNDTRRFALYHSTLLLPTLDKVMVIIVKAMKN 382
           + I+DPE KIQ L+E L+SKDWTKVCESLN+ RRFALYHS+LLLP L+KVM ++VKAMKN
Sbjct: 58  KPISDPESKIQGLIERLDSKDWTKVCESLNNARRFALYHSSLLLPFLEKVMSVVVKAMKN 117

Query: 383 PRSALIKTSIMTASDIFKSYGHGLLESSTSEAFDXXXXXXXXKASQDKRFVCEEAEKSLL 562
           PRSALIKTSIM +SDIF ++G  LL+S TS+AFD        KASQDK+FVCEEA+++L 
Sbjct: 118 PRSALIKTSIMASSDIFYAFGDQLLDS-TSDAFDSLLLQLLLKASQDKKFVCEEADRALN 176

Query: 563 VMVECMPSLALVSKLRVFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLVSLILIAAE 742
            +V+ M  L L++KL+++VSH N R+RAKAA+S ++ VSKM L  M EFGLVSL+ +AA+
Sbjct: 177 ALVKSMTPLPLLNKLKLYVSHVNLRIRAKAAISISNFVSKMELEGMNEFGLVSLVQVAAD 236

Query: 743 LLNDRLPEAREAARRTVASVYEAFTGDEDLKNLDLSAAESWQNFCASNLSPIQAQSLTKI 922
           LLNDRLPEAREAARRTV S+YEA+TG+E+ K       E WQNFC S+L PI AQS+ KI
Sbjct: 237 LLNDRLPEAREAARRTVISIYEAYTGNEEQKQ------EEWQNFCQSSLPPIHAQSIVKI 290

Query: 923 TSS 931
           TSS
Sbjct: 291 TSS 293


>ref|XP_002516924.1| clasp, putative [Ricinus communis] gi|223544012|gb|EEF45538.1|
           clasp, putative [Ricinus communis]
          Length = 297

 Score =  344 bits (882), Expect = 3e-92
 Identities = 182/303 (60%), Positives = 223/303 (73%), Gaps = 5/303 (1%)
 Frame = +2

Query: 38  MALRSLDNNLPT-TPERPKKLAKVTTILP----ISTNDENKLPVPVSADPAIDYVFSEDL 202
           MALR +DN LP  TPERPKK  KV   +        NDEN+ P+P+S D  IDY+ SE+L
Sbjct: 1   MALRPIDNALPVITPERPKKQPKVAVSIQKQVEFGVNDENRAPLPLSTDAVIDYISSENL 60

Query: 203 EAITDPEIKIQSLMEGLESKDWTKVCESLNDTRRFALYHSTLLLPTLDKVMVIIVKAMKN 382
           + + DPE KIQ L+EGLESKDWTKVCESLN+ RRFAL+HS+LLLP L+K+M+++VKAMKN
Sbjct: 61  KPMPDPEFKIQGLIEGLESKDWTKVCESLNNARRFALHHSSLLLPILEKIMLVVVKAMKN 120

Query: 383 PRSALIKTSIMTASDIFKSYGHGLLESSTSEAFDXXXXXXXXKASQDKRFVCEEAEKSLL 562
           PRSAL KTSIM +SDIF ++G  LL+ ST +AFD        KASQDKRFVCEEA+++L 
Sbjct: 121 PRSALCKTSIMASSDIFSAFGDKLLD-STIDAFDNLLLQLLLKASQDKRFVCEEADRALN 179

Query: 563 VMVECMPSLALVSKLRVFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLVSLILIAAE 742
            MV+ M  L L+ KLR +VSH N RVRAK A+  ++C S M L  MK+FGLV L+ +AA 
Sbjct: 180 AMVKSMAPLPLLHKLRSYVSHVNLRVRAKVAICISNCASNMDLEGMKKFGLVLLVQVAAN 239

Query: 743 LLNDRLPEAREAARRTVASVYEAFTGDEDLKNLDLSAAESWQNFCASNLSPIQAQSLTKI 922
           LLNDRLPEAREAAR  V S+YEA+T +E+LK       ESW NFC SNLS I AQS+ KI
Sbjct: 240 LLNDRLPEAREAARNIVTSIYEAYTKNEELKE------ESWHNFCQSNLSAIHAQSVAKI 293

Query: 923 TSS 931
           TS+
Sbjct: 294 TSA 296


>ref|XP_004164305.1| PREDICTED: protein FAM179B-like [Cucumis sativus]
          Length = 293

 Score =  340 bits (872), Expect = 4e-91
 Identities = 171/299 (57%), Positives = 230/299 (76%), Gaps = 1/299 (0%)
 Frame = +2

Query: 38  MALRSLDNNLPTTPERPKKLAKVTTILPIST-NDENKLPVPVSADPAIDYVFSEDLEAIT 214
           MALR +DN LP TPERPKK AKV  ++P+   NDEN+ P+P SAD  IDYV SE+L+ +T
Sbjct: 1   MALRPIDNALPVTPERPKKQAKV--VVPVQKGNDENQAPLPPSADATIDYVSSENLKPLT 58

Query: 215 DPEIKIQSLMEGLESKDWTKVCESLNDTRRFALYHSTLLLPTLDKVMVIIVKAMKNPRSA 394
           DP+  +Q+ +EGL+SKDW KVCE+LN+ RR A++HS LLLP+L+KVMV+++K+MKNPRSA
Sbjct: 59  DPDSNVQNFIEGLDSKDWVKVCETLNNARRLAIFHSDLLLPSLEKVMVVLMKSMKNPRSA 118

Query: 395 LIKTSIMTASDIFKSYGHGLLESSTSEAFDXXXXXXXXKASQDKRFVCEEAEKSLLVMVE 574
           LIKTSIM ++DIF ++G  LL++STS AFD        KASQDK+FVCEEA+K+L  +V+
Sbjct: 119 LIKTSIMASADIFNAFGDWLLDTSTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQ 178

Query: 575 CMPSLALVSKLRVFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLVSLILIAAELLND 754
            M  L L+ KLR +VSH+N RVRAKAA+  ++CVSKMGL  M ++G V L+ +A++LLND
Sbjct: 179 SMTPLPLLQKLRPYVSHSNLRVRAKAAIPISNCVSKMGLEEMNQYGFVPLLQMASDLLND 238

Query: 755 RLPEAREAARRTVASVYEAFTGDEDLKNLDLSAAESWQNFCASNLSPIQAQSLTKITSS 931
           RLPEAREAAR  V  +++A+T +E+ K       E+WQ+FC +NLSPI +QSL K+ +S
Sbjct: 239 RLPEAREAARSIVMGMFKAYTENEEDKQ------EAWQSFCQANLSPIHSQSLLKVVTS 291


Top