BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028103
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...    54   7e-10
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...    54   7e-10
ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...    56   9e-10
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...    56   9e-10
ref|XP_002324546.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-09

>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score = 53.5 bits (127), Expect(2) = 7e-10
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -2

Query: 113 PFVRTFLREGSSMYEMYIYTMGEKS*ALQMEDLLDP 6
           PFVR FL+E S M+EMYIYTMG++  AL+M  LLDP
Sbjct: 195 PFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDP 230



 Score = 34.7 bits (78), Expect(2) = 7e-10
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 165 KGSLFKLDRMHMMTKLRP 112
           KGSLFKL+ M+MMTKLRP
Sbjct: 178 KGSLFKLEHMNMMTKLRP 195


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score = 53.5 bits (127), Expect(2) = 7e-10
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -2

Query: 113 PFVRTFLREGSSMYEMYIYTMGEKS*ALQMEDLLDP 6
           PFVR FL+E S M+EMYIYTMG++  AL+M  LLDP
Sbjct: 181 PFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDP 216



 Score = 34.7 bits (78), Expect(2) = 7e-10
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 165 KGSLFKLDRMHMMTKLRP 112
           KGSLFKL+ M+MMTKLRP
Sbjct: 164 KGSLFKLEHMNMMTKLRP 181


>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 55.8 bits (133), Expect(2) = 9e-10
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -2

Query: 113 PFVRTFLREGSSMYEMYIYTMGEKS*ALQMEDLLDP 6
           P+V TFL+E S M+EMYIYTMGE+S AL+M  LLDP
Sbjct: 23  PYVHTFLKEASKMFEMYIYTMGERSYALEMAKLLDP 58



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -1

Query: 165 KGSLFKLDRMHMMTKLRP 112
           KG+LF L+ MHM+TKLRP
Sbjct: 6   KGNLFMLNTMHMLTKLRP 23


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 55.8 bits (133), Expect(2) = 9e-10
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -2

Query: 113 PFVRTFLREGSSMYEMYIYTMGEKS*ALQMEDLLDP 6
           P+V TFL+E S M+EMYIYTMGE+S AL+M  LLDP
Sbjct: 23  PYVHTFLKEASKMFEMYIYTMGERSYALEMAKLLDP 58



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -1

Query: 165 KGSLFKLDRMHMMTKLRP 112
           KG+LF L+ MHM+TKLRP
Sbjct: 6   KGNLFMLNTMHMLTKLRP 23


>ref|XP_002324546.1| predicted protein [Populus trichocarpa] gi|222865980|gb|EEF03111.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 56.6 bits (135), Expect(2) = 1e-09
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = -2

Query: 113 PFVRTFLREGSSMYEMYIYTMGEKS*ALQMEDLLDP 6
           PFVRTFL+E S M+EMYIYTMG+++ AL+M  LLDP
Sbjct: 68  PFVRTFLKEASQMFEMYIYTMGDRAYALEMAKLLDP 103



 Score = 30.8 bits (68), Expect(2) = 1e-09
 Identities = 14/18 (77%), Positives = 14/18 (77%)
 Frame = -1

Query: 165 KGSLFKLDRMHMMTKLRP 112
           KGSLF L  M MMTKLRP
Sbjct: 51  KGSLFMLSSMQMMTKLRP 68