BLASTX nr result

ID: Coptis23_contig00028101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028101
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73905.1| hypothetical protein VITISV_039777 [Vitis vinifera]    88   5e-23
ref|XP_002277073.1| PREDICTED: nodulation receptor kinase [Vitis...    88   5e-23
ref|XP_002512819.1| serine/threonine protein kinase, putative [R...    72   8e-17
ref|XP_003553985.1| PREDICTED: probable receptor-like protein ki...    70   1e-15
ref|NP_001235374.1| protein kinase family protein [Glycine max] ...    70   1e-15

>emb|CAN73905.1| hypothetical protein VITISV_039777 [Vitis vinifera]
          Length = 414

 Score = 87.8 bits (216), Expect(2) = 5e-23
 Identities = 46/70 (65%), Positives = 54/70 (77%)
 Frame = -2

Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31
           GSSDPS+Q GRN+G EL+L         R+AR F   EL+LATKNFS+I+LIGE KFGEV
Sbjct: 76  GSSDPSVQVGRNVGVELAL---------REARHFEMAELSLATKNFSDISLIGEGKFGEV 126

Query: 30  YKGLLHDGLF 1
           YKGLLHDG+F
Sbjct: 127 YKGLLHDGMF 136



 Score = 44.7 bits (104), Expect(2) = 5e-23
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = -1

Query: 340 MSRTXXXXXXXXXXXXXXXGFIIILLWFCLSHNRSISRTSET 215
           MSRT               G +I+++WFCLSHNRS+SRTSET
Sbjct: 34  MSRTLAAILGGAAGAVALVGIVILIIWFCLSHNRSVSRTSET 75


>ref|XP_002277073.1| PREDICTED: nodulation receptor kinase [Vitis vinifera]
           gi|296082255|emb|CBI21260.3| unnamed protein product
           [Vitis vinifera]
          Length = 381

 Score = 87.8 bits (216), Expect(2) = 5e-23
 Identities = 46/70 (65%), Positives = 54/70 (77%)
 Frame = -2

Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31
           GSSDPS+Q GRN+G EL+L         R+AR F   EL+LATKNFS+I+LIGE KFGEV
Sbjct: 43  GSSDPSVQVGRNVGVELAL---------REARHFEMAELSLATKNFSDISLIGEGKFGEV 93

Query: 30  YKGLLHDGLF 1
           YKGLLHDG+F
Sbjct: 94  YKGLLHDGMF 103



 Score = 44.7 bits (104), Expect(2) = 5e-23
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = -1

Query: 340 MSRTXXXXXXXXXXXXXXXGFIIILLWFCLSHNRSISRTSET 215
           MSRT               G +I+++WFCLSHNRS+SRTSET
Sbjct: 1   MSRTLAAILGGAAGAVALVGIVILIIWFCLSHNRSVSRTSET 42


>ref|XP_002512819.1| serine/threonine protein kinase, putative [Ricinus communis]
           gi|223547830|gb|EEF49322.1| serine/threonine protein
           kinase, putative [Ricinus communis]
          Length = 381

 Score = 71.6 bits (174), Expect(2) = 8e-17
 Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
 Frame = -2

Query: 210 GSSDPSLQA-GRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGE 34
           GSSDPS+QA GR++G ELSL         R+AR F  +EL+ ATKNF + NLIG  KFGE
Sbjct: 43  GSSDPSIQAPGRHVGVELSL---------REARRFEMDELSHATKNFVDKNLIGIGKFGE 93

Query: 33  VYKGLLHDGL 4
           VYKGLL+DG+
Sbjct: 94  VYKGLLNDGM 103



 Score = 40.0 bits (92), Expect(2) = 8e-17
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -1

Query: 277 IIILLWFCLSHNRSISRTSET 215
           +I L+WFCLSH +S+SRTSET
Sbjct: 22  VIFLIWFCLSHKKSVSRTSET 42


>ref|XP_003553985.1| PREDICTED: probable receptor-like protein kinase At1g30570-like
           [Glycine max]
          Length = 379

 Score = 70.5 bits (171), Expect(2) = 1e-15
 Identities = 42/69 (60%), Positives = 47/69 (68%)
 Frame = -2

Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31
           GSSDPS Q GR+   EL +         RD R F  EEL+LATKNFS+ NLIGE KFGEV
Sbjct: 43  GSSDPS-QVGRHGAIELPI---------RDTRRFEMEELSLATKNFSDKNLIGEGKFGEV 92

Query: 30  YKGLLHDGL 4
           YKGLL DG+
Sbjct: 93  YKGLLQDGM 101



 Score = 37.4 bits (85), Expect(2) = 1e-15
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -1

Query: 274 IILLWFCLSHNRSISRTSET 215
           IIL+WFCLS  R++SRTSET
Sbjct: 23  IILIWFCLSRQRNVSRTSET 42


>ref|NP_001235374.1| protein kinase family protein [Glycine max]
           gi|223452478|gb|ACM89566.1| protein kinase family
           protein [Glycine max]
          Length = 379

 Score = 70.5 bits (171), Expect(2) = 1e-15
 Identities = 42/69 (60%), Positives = 47/69 (68%)
 Frame = -2

Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31
           GSSDPS Q GR+   EL +         RD R F  EEL+LATKNFS+ NLIGE KFGEV
Sbjct: 43  GSSDPS-QVGRHGAMELPI---------RDTRRFEMEELSLATKNFSDKNLIGEGKFGEV 92

Query: 30  YKGLLHDGL 4
           YKGLL DG+
Sbjct: 93  YKGLLQDGM 101



 Score = 37.4 bits (85), Expect(2) = 1e-15
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -1

Query: 274 IILLWFCLSHNRSISRTSET 215
           IIL+WFCLS  R++SRTSET
Sbjct: 23  IILIWFCLSRQRNVSRTSET 42


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