BLASTX nr result
ID: Coptis23_contig00028101
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028101 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN73905.1| hypothetical protein VITISV_039777 [Vitis vinifera] 88 5e-23 ref|XP_002277073.1| PREDICTED: nodulation receptor kinase [Vitis... 88 5e-23 ref|XP_002512819.1| serine/threonine protein kinase, putative [R... 72 8e-17 ref|XP_003553985.1| PREDICTED: probable receptor-like protein ki... 70 1e-15 ref|NP_001235374.1| protein kinase family protein [Glycine max] ... 70 1e-15 >emb|CAN73905.1| hypothetical protein VITISV_039777 [Vitis vinifera] Length = 414 Score = 87.8 bits (216), Expect(2) = 5e-23 Identities = 46/70 (65%), Positives = 54/70 (77%) Frame = -2 Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31 GSSDPS+Q GRN+G EL+L R+AR F EL+LATKNFS+I+LIGE KFGEV Sbjct: 76 GSSDPSVQVGRNVGVELAL---------REARHFEMAELSLATKNFSDISLIGEGKFGEV 126 Query: 30 YKGLLHDGLF 1 YKGLLHDG+F Sbjct: 127 YKGLLHDGMF 136 Score = 44.7 bits (104), Expect(2) = 5e-23 Identities = 21/42 (50%), Positives = 26/42 (61%) Frame = -1 Query: 340 MSRTXXXXXXXXXXXXXXXGFIIILLWFCLSHNRSISRTSET 215 MSRT G +I+++WFCLSHNRS+SRTSET Sbjct: 34 MSRTLAAILGGAAGAVALVGIVILIIWFCLSHNRSVSRTSET 75 >ref|XP_002277073.1| PREDICTED: nodulation receptor kinase [Vitis vinifera] gi|296082255|emb|CBI21260.3| unnamed protein product [Vitis vinifera] Length = 381 Score = 87.8 bits (216), Expect(2) = 5e-23 Identities = 46/70 (65%), Positives = 54/70 (77%) Frame = -2 Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31 GSSDPS+Q GRN+G EL+L R+AR F EL+LATKNFS+I+LIGE KFGEV Sbjct: 43 GSSDPSVQVGRNVGVELAL---------REARHFEMAELSLATKNFSDISLIGEGKFGEV 93 Query: 30 YKGLLHDGLF 1 YKGLLHDG+F Sbjct: 94 YKGLLHDGMF 103 Score = 44.7 bits (104), Expect(2) = 5e-23 Identities = 21/42 (50%), Positives = 26/42 (61%) Frame = -1 Query: 340 MSRTXXXXXXXXXXXXXXXGFIIILLWFCLSHNRSISRTSET 215 MSRT G +I+++WFCLSHNRS+SRTSET Sbjct: 1 MSRTLAAILGGAAGAVALVGIVILIIWFCLSHNRSVSRTSET 42 >ref|XP_002512819.1| serine/threonine protein kinase, putative [Ricinus communis] gi|223547830|gb|EEF49322.1| serine/threonine protein kinase, putative [Ricinus communis] Length = 381 Score = 71.6 bits (174), Expect(2) = 8e-17 Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 1/70 (1%) Frame = -2 Query: 210 GSSDPSLQA-GRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGE 34 GSSDPS+QA GR++G ELSL R+AR F +EL+ ATKNF + NLIG KFGE Sbjct: 43 GSSDPSIQAPGRHVGVELSL---------REARRFEMDELSHATKNFVDKNLIGIGKFGE 93 Query: 33 VYKGLLHDGL 4 VYKGLL+DG+ Sbjct: 94 VYKGLLNDGM 103 Score = 40.0 bits (92), Expect(2) = 8e-17 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = -1 Query: 277 IIILLWFCLSHNRSISRTSET 215 +I L+WFCLSH +S+SRTSET Sbjct: 22 VIFLIWFCLSHKKSVSRTSET 42 >ref|XP_003553985.1| PREDICTED: probable receptor-like protein kinase At1g30570-like [Glycine max] Length = 379 Score = 70.5 bits (171), Expect(2) = 1e-15 Identities = 42/69 (60%), Positives = 47/69 (68%) Frame = -2 Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31 GSSDPS Q GR+ EL + RD R F EEL+LATKNFS+ NLIGE KFGEV Sbjct: 43 GSSDPS-QVGRHGAIELPI---------RDTRRFEMEELSLATKNFSDKNLIGEGKFGEV 92 Query: 30 YKGLLHDGL 4 YKGLL DG+ Sbjct: 93 YKGLLQDGM 101 Score = 37.4 bits (85), Expect(2) = 1e-15 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -1 Query: 274 IILLWFCLSHNRSISRTSET 215 IIL+WFCLS R++SRTSET Sbjct: 23 IILIWFCLSRQRNVSRTSET 42 >ref|NP_001235374.1| protein kinase family protein [Glycine max] gi|223452478|gb|ACM89566.1| protein kinase family protein [Glycine max] Length = 379 Score = 70.5 bits (171), Expect(2) = 1e-15 Identities = 42/69 (60%), Positives = 47/69 (68%) Frame = -2 Query: 210 GSSDPSLQAGRNIGDELSLAEGRSLSD*RDARCFMFEELALATKNFSEINLIGE*KFGEV 31 GSSDPS Q GR+ EL + RD R F EEL+LATKNFS+ NLIGE KFGEV Sbjct: 43 GSSDPS-QVGRHGAMELPI---------RDTRRFEMEELSLATKNFSDKNLIGEGKFGEV 92 Query: 30 YKGLLHDGL 4 YKGLL DG+ Sbjct: 93 YKGLLQDGM 101 Score = 37.4 bits (85), Expect(2) = 1e-15 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -1 Query: 274 IILLWFCLSHNRSISRTSET 215 IIL+WFCLS R++SRTSET Sbjct: 23 IILIWFCLSRQRNVSRTSET 42