BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028096
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana] ...   148   4e-34
ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arab...   148   4e-34
ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein no...   138   5e-31
ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic...   135   4e-30
ref|XP_004146026.1| PREDICTED: rab3 GTPase-activating protein no...   130   8e-29

>ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8777474|dbj|BAA97054.1| unnamed protein product
           [Arabidopsis thaliana] gi|63147384|gb|AAY34165.1|
           At3g14910 [Arabidopsis thaliana]
           gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis
           thaliana] gi|332642066|gb|AEE75587.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 455

 Score =  148 bits (374), Expect = 4e-34
 Identities = 79/132 (59%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = +2

Query: 65  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLIVIINYHE 244
           MA++ HLTE+G I C ELTE GAGK E WL+ NPNLL++L +HS ALANR LI+I+N+ +
Sbjct: 1   MAKRIHLTELGCIACEELTELGAGK-EGWLVNNPNLLSALDSHSLALANRFLILIVNWGD 59

Query: 245 NHVIK-KIKPLLTSIEGE-ITAIEWIVFDDTRVILIGTSNGYLLFYSLDGDLIHIQIVHP 418
               + KI+P L+ IE E ITAIEW+VFDD RV++ GTS GYLL YS+ GDLIH QIVH 
Sbjct: 60  PDAPRVKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVTGDLIHKQIVHQ 119

Query: 419 GNIRRLRVCGNK 454
             I ++RV G K
Sbjct: 120 SRILKIRVRGTK 131


>ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
           lyrata] gi|297328741|gb|EFH59160.1| hypothetical protein
           ARALYDRAFT_478912 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  148 bits (374), Expect = 4e-34
 Identities = 78/132 (59%), Positives = 100/132 (75%), Gaps = 2/132 (1%)
 Frame = +2

Query: 65  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLIVIINYHE 244
           MA++ HLTE+G I C EL+E GAGK E WL+ NPNLL++L +HS ALANR LI+I+N+ +
Sbjct: 1   MAKRIHLTELGCIACEELSELGAGK-EGWLVNNPNLLSALDSHSLALANRFLILIVNWGD 59

Query: 245 NHVIK-KIKPLLTSIEGE-ITAIEWIVFDDTRVILIGTSNGYLLFYSLDGDLIHIQIVHP 418
               + KI+P L+ IE E ITAIEW+VFDD RV++ GTS GYLL YS+ GDLIH Q+VHP
Sbjct: 60  PDAPRLKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVAGDLIHKQMVHP 119

Query: 419 GNIRRLRVCGNK 454
             I ++RV G K
Sbjct: 120 SRILKIRVRGTK 131


>ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
           [Vitis vinifera] gi|302142895|emb|CBI20190.3| unnamed
           protein product [Vitis vinifera]
          Length = 457

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 5/135 (3%)
 Frame = +2

Query: 65  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLIVIINYHE 244
           MAR+ + TE+G I C EL+E GAGK E WL+ENP+L+ +L T S ALANRS ++++ + E
Sbjct: 1   MARRVYTTELGCIACNELSELGAGK-EAWLVENPSLICALDTDSLALANRSFVLVLGWSE 59

Query: 245 N----HVIKKIKPLLTSIEGE-ITAIEWIVFDDTRVILIGTSNGYLLFYSLDGDLIHIQI 409
           N    +   KI+P L+ IE E ITA+EW+VFD+ RV+ +GTS+GYL+ YSL  DLIH Q+
Sbjct: 60  NGDPYNSPVKIRPTLSQIETERITAVEWLVFDEIRVLAVGTSSGYLMIYSLGADLIHKQM 119

Query: 410 VHPGNIRRLRVCGNK 454
           ++PG I + RV G K
Sbjct: 120 INPGRILKFRVRGTK 134


>ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic subunit, putative
           [Ricinus communis] gi|223536194|gb|EEF37847.1| rab3
           gtpase-activating protein non-catalytic subunit,
           putative [Ricinus communis]
          Length = 484

 Score =  135 bits (339), Expect = 4e-30
 Identities = 69/130 (53%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
 Frame = +2

Query: 68  ARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLIVIINYHEN 247
           ++++H TE+G I C EL++ GAGK E WL++NPNL  +L THS A++NR LI+I  + + 
Sbjct: 3   SKRSHTTELGCIACEELSDVGAGK-EGWLVDNPNLKCALDTHSIAISNRYLILITGWDDG 61

Query: 248 HVIKKIKPLLTSIEGE-ITAIEWIVFDDTRVILIGTSNGYLLFYSLDGDLIHIQIVHPGN 424
             + KI+P L+ IE E ITA+EW+VFD+ RV+ +GTS GY L YSLDG LIH Q+V+PG 
Sbjct: 62  PRL-KIRPDLSPIESESITALEWLVFDEIRVVAVGTSCGYFLVYSLDGHLIHKQMVYPGR 120

Query: 425 IRRLRVCGNK 454
           I ++RV G K
Sbjct: 121 ILKIRVRGTK 130


>ref|XP_004146026.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Cucumis sativus]
          Length = 456

 Score =  130 bits (328), Expect = 8e-29
 Identities = 70/133 (52%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
 Frame = +2

Query: 65  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLIVIINYHE 244
           MAR+T  TE+G I C +L +FGAGK E WL+++PNLL +L +HS ALANRS+I+++ +  
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGK-EGWLVDSPNLLCALDSHSLALANRSIILVLGWSG 59

Query: 245 NHVIK-KIKPL-LTSIEGE-ITAIEWIVFDDTRVILIGTSNGYLLFYSLDGDLIHIQIVH 415
           +     KI+P  L+ IE E I+A+EW+V D+ +VIL+GTS GY L YSL GDLI  Q++H
Sbjct: 60  SDGYPLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLRGDLILKQMIH 119

Query: 416 PGNIRRLRVCGNK 454
           PG I ++RV G+K
Sbjct: 120 PGRILKIRVHGSK 132