BLASTX nr result
ID: Coptis23_contig00028086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00028086
(1014 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16473.3| unnamed protein product [Vitis vinifera] 308 2e-81
ref|XP_002285660.1| PREDICTED: uncharacterized protein yqeH-like... 308 2e-81
ref|XP_004162026.1| PREDICTED: uncharacterized protein YqeH-like... 306 5e-81
ref|XP_004142247.1| PREDICTED: uncharacterized protein YqeH-like... 306 5e-81
ref|NP_567364.1| GTPase YqeH-like protein [Arabidopsis thaliana]... 301 1e-79
>emb|CBI16473.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 308 bits (788), Expect = 2e-81
Identities = 149/194 (76%), Positives = 169/194 (87%)
Frame = +2
Query: 2 LPGNVKLFDILGLLNPHPHQITTRLTREEQKMVHVSKELRPRTYRIKAGHTVHIGGLMRL 181
L G KLFD GLLNPH QITTRLT EEQK+VHVSKEL+PRTYRIKAGH+VHI GL RL
Sbjct: 386 LTGAAKLFDTPGLLNPH--QITTRLTGEEQKLVHVSKELKPRTYRIKAGHSVHIAGLARL 443
Query: 182 DVEEASSESVYITVWASPYLPLHMGKTENVSTMLEDHFGLQLQPPIGENRAEELGEWVRK 361
DVEE S ++VYITVWASPYLPLHMGKTEN TM+EDHFG QLQPPIGE R +ELG+W RK
Sbjct: 444 DVEELSVDTVYITVWASPYLPLHMGKTENACTMVEDHFGRQLQPPIGERRVKELGKWERK 503
Query: 362 EFRVNGNSWDVSSVDIAASGLGWFAVGLKGDAVLSVWTYDGVDVVLRSSLIPQRAQFFEL 541
EFRV+G SWD SSVD+A +GLGWFAVGLKG+AVL VWTYDGVD++LR+SL+P R+Q FE+
Sbjct: 504 EFRVSGTSWDSSSVDVAVAGLGWFAVGLKGEAVLGVWTYDGVDLILRNSLLPYRSQNFEV 563
Query: 542 AGFTVSKVVSSADR 583
AGFTVSK+VS AD+
Sbjct: 564 AGFTVSKIVSKADQ 577
>ref|XP_002285660.1| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 584
Score = 308 bits (788), Expect = 2e-81
Identities = 149/194 (76%), Positives = 169/194 (87%)
Frame = +2
Query: 2 LPGNVKLFDILGLLNPHPHQITTRLTREEQKMVHVSKELRPRTYRIKAGHTVHIGGLMRL 181
L G KLFD GLLNPH QITTRLT EEQK+VHVSKEL+PRTYRIKAGH+VHI GL RL
Sbjct: 360 LTGAAKLFDTPGLLNPH--QITTRLTGEEQKLVHVSKELKPRTYRIKAGHSVHIAGLARL 417
Query: 182 DVEEASSESVYITVWASPYLPLHMGKTENVSTMLEDHFGLQLQPPIGENRAEELGEWVRK 361
DVEE S ++VYITVWASPYLPLHMGKTEN TM+EDHFG QLQPPIGE R +ELG+W RK
Sbjct: 418 DVEELSVDTVYITVWASPYLPLHMGKTENACTMVEDHFGRQLQPPIGERRVKELGKWERK 477
Query: 362 EFRVNGNSWDVSSVDIAASGLGWFAVGLKGDAVLSVWTYDGVDVVLRSSLIPQRAQFFEL 541
EFRV+G SWD SSVD+A +GLGWFAVGLKG+AVL VWTYDGVD++LR+SL+P R+Q FE+
Sbjct: 478 EFRVSGTSWDSSSVDVAVAGLGWFAVGLKGEAVLGVWTYDGVDLILRNSLLPYRSQNFEV 537
Query: 542 AGFTVSKVVSSADR 583
AGFTVSK+VS AD+
Sbjct: 538 AGFTVSKIVSKADQ 551
>ref|XP_004162026.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 568
Score = 306 bits (784), Expect = 5e-81
Identities = 142/193 (73%), Positives = 167/193 (86%)
Frame = +2
Query: 5 PGNVKLFDILGLLNPHPHQITTRLTREEQKMVHVSKELRPRTYRIKAGHTVHIGGLMRLD 184
P KLFD GLLNPH QITTRLTREEQK+VH+SKEL+PRTYRIK GHT+H+ GLMRLD
Sbjct: 351 PAQAKLFDTPGLLNPH--QITTRLTREEQKLVHISKELKPRTYRIKVGHTIHVAGLMRLD 408
Query: 185 VEEASSESVYITVWASPYLPLHMGKTENVSTMLEDHFGLQLQPPIGENRAEELGEWVRKE 364
VEE + +++Y+TVWASPYLPLHMGKTEN + M EDHFG+QLQPPIG++R EELG+WVR+E
Sbjct: 409 VEETNLDTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGKWVRRE 468
Query: 365 FRVNGNSWDVSSVDIAASGLGWFAVGLKGDAVLSVWTYDGVDVVLRSSLIPQRAQFFELA 544
FRV G SWD S VD A +GLGWFA+GLKG+ VLS+WTY+GVD+VLRSS+IP RA FFE A
Sbjct: 469 FRVCGTSWDSSCVDAAVAGLGWFAIGLKGEVVLSIWTYEGVDIVLRSSVIPHRANFFEDA 528
Query: 545 GFTVSKVVSSADR 583
GFTVSK+VS AD+
Sbjct: 529 GFTVSKIVSKADQ 541
>ref|XP_004142247.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 566
Score = 306 bits (784), Expect = 5e-81
Identities = 142/193 (73%), Positives = 167/193 (86%)
Frame = +2
Query: 5 PGNVKLFDILGLLNPHPHQITTRLTREEQKMVHVSKELRPRTYRIKAGHTVHIGGLMRLD 184
P KLFD GLLNPH QITTRLTREEQK+VH+SKEL+PRTYRIK GHT+H+ GLMRLD
Sbjct: 351 PAQAKLFDTPGLLNPH--QITTRLTREEQKLVHISKELKPRTYRIKVGHTIHVAGLMRLD 408
Query: 185 VEEASSESVYITVWASPYLPLHMGKTENVSTMLEDHFGLQLQPPIGENRAEELGEWVRKE 364
VEE + +++Y+TVWASPYLPLHMGKTEN + M EDHFG+QLQPPIG++R EELG+WVR+E
Sbjct: 409 VEETNLDTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGKWVRRE 468
Query: 365 FRVNGNSWDVSSVDIAASGLGWFAVGLKGDAVLSVWTYDGVDVVLRSSLIPQRAQFFELA 544
FRV G SWD S VD A +GLGWFA+GLKG+ VLS+WTY+GVD+VLRSS+IP RA FFE A
Sbjct: 469 FRVCGTSWDSSCVDAAVAGLGWFAIGLKGEVVLSIWTYEGVDIVLRSSVIPHRANFFEDA 528
Query: 545 GFTVSKVVSSADR 583
GFTVSK+VS AD+
Sbjct: 529 GFTVSKIVSKADQ 541
>ref|NP_567364.1| GTPase YqeH-like protein [Arabidopsis thaliana]
gi|4115915|gb|AAD03426.1| contains similarity to Helix
pomatia br-1 protein (GB: X96994) [Arabidopsis thaliana]
gi|15293099|gb|AAK93660.1| unknown protein [Arabidopsis
thaliana] gi|21281233|gb|AAM45035.1| unknown protein
[Arabidopsis thaliana] gi|332657510|gb|AEE82910.1|
GTPase YqeH-like protein [Arabidopsis thaliana]
Length = 597
Score = 301 bits (772), Expect = 1e-79
Identities = 143/194 (73%), Positives = 166/194 (85%)
Frame = +2
Query: 2 LPGNVKLFDILGLLNPHPHQITTRLTREEQKMVHVSKELRPRTYRIKAGHTVHIGGLMRL 181
LP KLFD GLLNPH QITTRLTREEQ++VH+SKEL+PRTYRIK G+TVHIGGLMRL
Sbjct: 363 LPFEAKLFDTPGLLNPH--QITTRLTREEQRLVHISKELKPRTYRIKEGYTVHIGGLMRL 420
Query: 182 DVEEASSESVYITVWASPYLPLHMGKTENVSTMLEDHFGLQLQPPIGENRAEELGEWVRK 361
D++EAS +S+Y+TVWASPY+PLHMGK EN LEDHFG +LQPPIGE R EELG+WVRK
Sbjct: 421 DIDEASVDSLYVTVWASPYVPLHMGKKENAYKTLEDHFGCRLQPPIGEKRVEELGKWVRK 480
Query: 362 EFRVNGNSWDVSSVDIAASGLGWFAVGLKGDAVLSVWTYDGVDVVLRSSLIPQRAQFFEL 541
EFRV+G SWD SSVDIA SGLGWFA+GLKGDA+L VWT++G+DV R SL+PQRA FE
Sbjct: 481 EFRVSGTSWDTSSVDIAVSGLGWFALGLKGDAILGVWTHEGIDVFCRDSLLPQRAHTFED 540
Query: 542 AGFTVSKVVSSADR 583
+GFTVSK+V+ ADR
Sbjct: 541 SGFTVSKIVAKADR 554