BLASTX nr result

ID: Coptis23_contig00028065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028065
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278220.1| PREDICTED: uncharacterized protein LOC100260...    95   5e-18
ref|XP_002522944.1| conserved hypothetical protein [Ricinus comm...    84   9e-15
ref|XP_002522942.1| conserved hypothetical protein [Ricinus comm...    84   9e-15
ref|XP_003546149.1| PREDICTED: uncharacterized protein LOC100796...    77   2e-12
ref|XP_002518488.1| conserved hypothetical protein [Ricinus comm...    70   2e-10

>ref|XP_002278220.1| PREDICTED: uncharacterized protein LOC100260689 [Vitis vinifera]
          Length = 125

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
 Frame = +3

Query: 27  MGNCLRPESSTTWAGEDWSCAMSPKRTKKNVLHKKTKRNKVNTEGKAPLSEDNAYVSSS- 203
           MGNCLR E    WAGEDW     P     +  H+ +    +  E  + L E+  + SSS 
Sbjct: 1   MGNCLRHEPPMQWAGEDWGSLAPPTHFSGDTHHEISSDKAMKGEKDSLLKENPGFSSSSS 60

Query: 204 -------TKIKLTITRKQLEELLGRLDDIQGLSVEQVFDKLVHNIDQFNTCKRPWRPVLH 362
                  T++K+ I++KQLEELLG++D +QGL+V QV   L++  D+F T +R WRP L 
Sbjct: 61  SSSSSTTTEVKVKISKKQLEELLGKVD-VQGLTVHQVLQHLMNVSDRFETEQRSWRPALQ 119

Query: 363 SIPEDN 380
           SIPE N
Sbjct: 120 SIPEVN 125


>ref|XP_002522944.1| conserved hypothetical protein [Ricinus communis]
           gi|223537756|gb|EEF39374.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 130

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 55/131 (41%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
 Frame = +3

Query: 27  MGNCLRPESSTTWAGEDWSCAMSPKRTKKNVLHKKTKRNKVNTEGKAPLSEDN------- 185
           MGNCLR ESS  W G+DW       +   +      + N  N E K  L  DN       
Sbjct: 1   MGNCLRRESSMQWGGDDWGSPAPEVQLFSSSTRHVRQENITNIEEKGLLIGDNKGTTISP 60

Query: 186 -------AYVSSSTKIKLTITRKQLEELLGRLDDIQGLSVEQVFDKLVHNID-QFNTCKR 341
                  A  SS  ++K+ IT+KQLEELLGR+ D+  LS+EQV  +LV   D  F T +R
Sbjct: 61  TSAAAAGATTSSCRELKIKITKKQLEELLGRV-DMNELSIEQVLVQLVKVSDSSFETHRR 119

Query: 342 PWRPVLHSIPE 374
            WRP L SIPE
Sbjct: 120 SWRPNLQSIPE 130


>ref|XP_002522942.1| conserved hypothetical protein [Ricinus communis]
           gi|223537754|gb|EEF39372.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 114

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = +3

Query: 27  MGNCLRPESSTTWAGEDWSCAMSPKRTKKNVLHKKTKRNKVNTEGKAPLSEDNAYVSSST 206
           MGNCLR ESS  W G+DW   +   R   +   ++ ++  +  E K   S  ++   +ST
Sbjct: 1   MGNCLRRESSMQWGGDDWGSPLPDDRFFSSNTRQEEEKGLLLGEDKG--STISSATVTST 58

Query: 207 KIKLTITRKQLEELLGRLDDIQGLSVEQVFDKLVHNID-QFNTCKRPWRPVLHSIPE 374
           ++K+ IT+KQLEELLGR+ D++ LS+EQV  +L+   D  F T +R WRP L SIPE
Sbjct: 59  EVKIKITKKQLEELLGRV-DMKELSIEQVLAQLMKVGDPSFETHQRSWRPNLQSIPE 114


>ref|XP_003546149.1| PREDICTED: uncharacterized protein LOC100796265 [Glycine max]
          Length = 129

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
 Frame = +3

Query: 27  MGNCLRP---ESSTTWAGEDWSCAMSPKRTKKNVLHKKTKRNKV-NTEGKAPLSEDNAYV 194
           MGNC       SS  W G+DW    S K+ +KN +  +     + N E +  L    A  
Sbjct: 1   MGNCCASATESSSMDWGGDDWGSLSSSKKRRKNKVFDEVHGESLGNVEKEKLLGALRASS 60

Query: 195 SSSTKIKLTITRKQLEELLGRLDDIQG-------LSVEQVFDKLVHNIDQFNTCKRPWRP 353
            ++ K+K+ I++K+LE+LLG   +I          S EQV  +L+H  D  +   RPWRP
Sbjct: 61  DANGKVKIKISKKELEKLLGSEKEINNKQLGEGHASAEQVLARLIHARDHDDVHHRPWRP 120

Query: 354 VLHSIPEDN 380
           VL SIPE N
Sbjct: 121 VLQSIPEVN 129


>ref|XP_002518488.1| conserved hypothetical protein [Ricinus communis]
           gi|223542333|gb|EEF43875.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
 Frame = +3

Query: 27  MGNCLR---PESSTTWAGEDWSCAMSPKRTKKNVLHKK--TKRNKVNTEGKAPLSEDNAY 191
           MGNC R     SS  WAG+DW      K +  +  H    T+R ++  E    +    + 
Sbjct: 1   MGNCCRRVSSSSSVVWAGDDWGSVGQEKISSSDHSHHHDITERQRLLGEDLDMMGGFMSS 60

Query: 192 VSSSTK-IKLTITRKQLEELLGRLDDIQGLSVEQVFDKLVH------NIDQFNTCKRPWR 350
            SSST+ +K+ IT+K+LEEL+ R+ D+QGLS+E+V   L++      N++      R W+
Sbjct: 61  SSSSTREVKIKITKKELEELMARV-DMQGLSMEEVLASLINSSSADKNLEMECHHHRSWK 119

Query: 351 PVLHSIPE 374
           P L SIPE
Sbjct: 120 PALQSIPE 127


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