BLASTX nr result

ID: Coptis23_contig00028062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028062
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23563.3| unnamed protein product [Vitis vinifera]              181   2e-43
ref|XP_002321219.1| predicted protein [Populus trichocarpa] gi|2...   178   2e-42
ref|XP_002302835.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
emb|CAN71628.1| hypothetical protein VITISV_015578 [Vitis vinifera]   175   1e-41
ref|XP_002524569.1| conserved hypothetical protein [Ricinus comm...   174   3e-41

>emb|CBI23563.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score =  181 bits (459), Expect = 2e-43
 Identities = 96/154 (62%), Positives = 103/154 (66%)
 Frame = +2

Query: 290 RICVKCSAVQESSPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLMEVDVIPSLSA 469
           R  + CSAVQESS                                  Q+ME DVIPSL +
Sbjct: 12  RRIIACSAVQESSTPTVAAETKEVKPAQEKGPAKPKPPAKAPVKPLPQMMEEDVIPSLKS 71

Query: 470 TFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKGFSLSSYGSEVSTV 649
             EAQ+DLSEIELSF DNRLEGSF K    YSFW FFP+GVLTGPKGFSLSSYGS  STV
Sbjct: 72  ILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFPNGVLTGPKGFSLSSYGSGSSTV 131

Query: 650 EPFLIDEKKITGKHVVFWVEKRLAAQGILPVWKE 751
           EPFLIDEK+IT KHVVFWVEKRLAAQGI+PVWKE
Sbjct: 132 EPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 165


>ref|XP_002321219.1| predicted protein [Populus trichocarpa] gi|222861992|gb|EEE99534.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  178 bits (451), Expect = 2e-42
 Identities = 96/150 (64%), Positives = 105/150 (70%)
 Frame = +2

Query: 299 VKCSAVQESSPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLMEVDVIPSLSATFE 478
           + CSAVQESS S                                QLME DVIPSL AT E
Sbjct: 47  ITCSAVQESSTSTVAADATEVKPVEKKAPAKPKKAPAKPLA---QLMEEDVIPSLKATLE 103

Query: 479 AQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKGFSLSSYGSEVSTVEPF 658
           AQ+D++E+ELSF DNRLEGSF++  T YSFW FFPDG LTGPKGFSLSSYGS VSTVEPF
Sbjct: 104 AQDDITELELSFTDNRLEGSFLQKGTPYSFWAFFPDG-LTGPKGFSLSSYGSGVSTVEPF 162

Query: 659 LIDEKKITGKHVVFWVEKRLAAQGILPVWK 748
           LIDEKKIT KH+VFWVEKRLAAQGI+PVWK
Sbjct: 163 LIDEKKITEKHIVFWVEKRLAAQGIIPVWK 192


>ref|XP_002302835.1| predicted protein [Populus trichocarpa] gi|222844561|gb|EEE82108.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  177 bits (449), Expect = 3e-42
 Identities = 85/106 (80%), Positives = 93/106 (87%)
 Frame = +2

Query: 431 QLMEVDVIPSLSATFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKG 610
           QLME DVIPSL AT EAQ+ ++E+EL F D RLEGSF+K  T YSFW FFPDGVLTGPKG
Sbjct: 51  QLMEEDVIPSLKATLEAQDHITELELPFEDKRLEGSFLKKGTPYSFWAFFPDGVLTGPKG 110

Query: 611 FSLSSYGSEVSTVEPFLIDEKKITGKHVVFWVEKRLAAQGILPVWK 748
           FSLSSYGS VSTVEPFLIDEKKIT KH+VFWVEKRLAAQGI+PVW+
Sbjct: 111 FSLSSYGSGVSTVEPFLIDEKKITEKHIVFWVEKRLAAQGIIPVWR 156


>emb|CAN71628.1| hypothetical protein VITISV_015578 [Vitis vinifera]
          Length = 220

 Score =  175 bits (443), Expect = 1e-41
 Identities = 86/107 (80%), Positives = 92/107 (85%)
 Frame = +2

Query: 431 QLMEVDVIPSLSATFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKG 610
           Q+ME DVIPSL +  EAQ+DLSEIELSF DNRLEGSF K    YSFW FF +GVLTGPKG
Sbjct: 114 QMMEEDVIPSLKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFXNGVLTGPKG 173

Query: 611 FSLSSYGSEVSTVEPFLIDEKKITGKHVVFWVEKRLAAQGILPVWKE 751
           FSLSSYGS  STVEPFLIDEK+IT KHVVFWVEKRLAAQGI+PVWKE
Sbjct: 174 FSLSSYGSGSSTVEPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 220


>ref|XP_002524569.1| conserved hypothetical protein [Ricinus communis]
           gi|223536122|gb|EEF37777.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score =  174 bits (440), Expect = 3e-41
 Identities = 94/166 (56%), Positives = 103/166 (62%), Gaps = 7/166 (4%)
 Frame = +2

Query: 275 KGNMPRICVKCSAVQESSPS-------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 433
           K  + R  + CSAVQESS S       +                               Q
Sbjct: 37  KSAISRRSITCSAVQESSTSTSTSTSTVAADTKEVKKAEEKTPAAKPKPAAKAPVKPLPQ 96

Query: 434 LMEVDVIPSLSATFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKGF 613
           LME DVIPSL A FE + D++E+ELSF DNRLEGSF K    YSFW FFP GVLTG KGF
Sbjct: 97  LMEEDVIPSLKAIFETEQDITELELSFNDNRLEGSFRKKGNPYSFWAFFPSGVLTGTKGF 156

Query: 614 SLSSYGSEVSTVEPFLIDEKKITGKHVVFWVEKRLAAQGILPVWKE 751
           SLSSYG   STVEPFLIDEKKIT KH+VFWVEKRLAAQGI+PVWKE
Sbjct: 157 SLSSYGLGASTVEPFLIDEKKITAKHIVFWVEKRLAAQGIIPVWKE 202


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