BLASTX nr result

ID: Coptis23_contig00028057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028057
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273698.2| PREDICTED: charged multivesicular body prote...    86   1e-25
emb|CBI37046.3| unnamed protein product [Vitis vinifera]               86   1e-25
ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis] g...    82   3e-25
emb|CAN69261.1| hypothetical protein VITISV_004029 [Vitis vinifera]    87   3e-25
ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-24

>ref|XP_002273698.2| PREDICTED: charged multivesicular body protein 7 [Vitis vinifera]
          Length = 478

 Score = 85.5 bits (210), Expect(2) = 1e-25
 Identities = 47/71 (66%), Positives = 55/71 (77%)
 Frame = +2

Query: 2   KHVALRHVRQLKLSSESRERCTSLLNRDEEVLSDIEYAESTKKVSEAIQIDAKAIKGRGI 181
           K VALRH + LKL+SESRE+C S LNR EEVLS I  AESTKKVSEAIQI A+AI+   I
Sbjct: 298 KKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGARAIQENRI 357

Query: 182 SMEEVQSLMRE 214
            +EEVQ  ++E
Sbjct: 358 DVEEVQRCLQE 368



 Score = 56.2 bits (134), Expect(2) = 1e-25
 Identities = 31/81 (38%), Positives = 50/81 (61%)
 Frame = +1

Query: 199 ELDERVSSEKEVKDALGSGALAYTGIEDEDVEEEFKKLEMEPGDEILIKQIFETVADSSA 378
           EL + + S+K+V++AL     +Y  IEDED+EEEF+KLE+E G++ L   + +   D++A
Sbjct: 368 ELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEEFRKLELELGNQNLQILVSQAGVDTAA 427

Query: 379 VVQGSLVSASSADKILSNRKL 441
               +  S+ S    LS+ KL
Sbjct: 428 GETEASESSKSLCDALSDLKL 448


>emb|CBI37046.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score = 85.5 bits (210), Expect(2) = 1e-25
 Identities = 47/71 (66%), Positives = 55/71 (77%)
 Frame = +2

Query: 2   KHVALRHVRQLKLSSESRERCTSLLNRDEEVLSDIEYAESTKKVSEAIQIDAKAIKGRGI 181
           K VALRH + LKL+SESRE+C S LNR EEVLS I  AESTKKVSEAIQI A+AI+   I
Sbjct: 258 KKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGARAIQENRI 317

Query: 182 SMEEVQSLMRE 214
            +EEVQ  ++E
Sbjct: 318 DVEEVQRCLQE 328



 Score = 56.2 bits (134), Expect(2) = 1e-25
 Identities = 31/81 (38%), Positives = 50/81 (61%)
 Frame = +1

Query: 199 ELDERVSSEKEVKDALGSGALAYTGIEDEDVEEEFKKLEMEPGDEILIKQIFETVADSSA 378
           EL + + S+K+V++AL     +Y  IEDED+EEEF+KLE+E G++ L   + +   D++A
Sbjct: 328 ELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEEFRKLELELGNQNLQILVSQAGVDTAA 387

Query: 379 VVQGSLVSASSADKILSNRKL 441
               +  S+ S    LS+ KL
Sbjct: 388 GETEASESSKSLCDALSDLKL 408


>ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis]
           gi|223545649|gb|EEF47153.1| Protein CHMP7, putative
           [Ricinus communis]
          Length = 438

 Score = 81.6 bits (200), Expect(2) = 3e-25
 Identities = 43/71 (60%), Positives = 55/71 (77%)
 Frame = +2

Query: 2   KHVALRHVRQLKLSSESRERCTSLLNRDEEVLSDIEYAESTKKVSEAIQIDAKAIKGRGI 181
           K +ALRH R +KL+S+SRE+CTSL NR EEVL+ I  AESTKKV+EAIQI A+A+K   I
Sbjct: 259 KKMALRHARDMKLASDSREKCTSLFNRVEEVLNIIADAESTKKVTEAIQIGAQAMKQNKI 318

Query: 182 SMEEVQSLMRE 214
           ++EEV   + E
Sbjct: 319 TVEEVDLCLEE 329



 Score = 58.5 bits (140), Expect(2) = 3e-25
 Identities = 37/81 (45%), Positives = 48/81 (59%)
 Frame = +1

Query: 199 ELDERVSSEKEVKDALGSGALAYTGIEDEDVEEEFKKLEMEPGDEILIKQIFETVADSSA 378
           EL+E + S+K+V+ AL S   +YT IEDED+EEEFKKLEME G   L   +      S++
Sbjct: 329 ELEENIDSQKQVEKALESTP-SYTVIEDEDIEEEFKKLEMEVGTVDLQSPVPRIGMSSTS 387

Query: 379 VVQGSLVSASSADKILSNRKL 441
               + VS  S    LSN KL
Sbjct: 388 GETDNSVSTDSLSDALSNLKL 408


>emb|CAN69261.1| hypothetical protein VITISV_004029 [Vitis vinifera]
          Length = 418

 Score = 86.7 bits (213), Expect(2) = 3e-25
 Identities = 48/71 (67%), Positives = 55/71 (77%)
 Frame = +2

Query: 2   KHVALRHVRQLKLSSESRERCTSLLNRDEEVLSDIEYAESTKKVSEAIQIDAKAIKGRGI 181
           K VALRH + LKL+SESRE+C S LNR EEVLS I  AESTKKVSEAIQI A+AIK   I
Sbjct: 238 KKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGAQAIKENRI 297

Query: 182 SMEEVQSLMRE 214
            +EEVQ  ++E
Sbjct: 298 DVEEVQRCLQE 308



 Score = 53.5 bits (127), Expect(2) = 3e-25
 Identities = 30/81 (37%), Positives = 49/81 (60%)
 Frame = +1

Query: 199 ELDERVSSEKEVKDALGSGALAYTGIEDEDVEEEFKKLEMEPGDEILIKQIFETVADSSA 378
           EL + + S+K+V++AL     +Y  IEDED+EEEF+KLE+E G++     + +   D++A
Sbjct: 308 ELGDSIDSQKQVQEALAESDPSYADIEDEDIEEEFRKLELELGNQNPQILVSQAGVDTAA 367

Query: 379 VVQGSLVSASSADKILSNRKL 441
               +  S+ S    LS+ KL
Sbjct: 368 GETEASESSKSLCDALSDLKL 388


>ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|222844537|gb|EEE82084.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 84.3 bits (207), Expect(2) = 1e-24
 Identities = 44/71 (61%), Positives = 58/71 (81%)
 Frame = +2

Query: 2   KHVALRHVRQLKLSSESRERCTSLLNRDEEVLSDIEYAESTKKVSEAIQIDAKAIKGRGI 181
           K VALRH R++KL+ ESRERCTSLLNR EEVL+ I  AEST+KV+EAI+I A+A+K   I
Sbjct: 260 KKVALRHAREMKLALESRERCTSLLNRVEEVLNVIANAESTQKVTEAIRIGAEAMKQNKI 319

Query: 182 SMEEVQSLMRE 214
           ++EEV++ + E
Sbjct: 320 TVEEVENCLEE 330



 Score = 53.9 bits (128), Expect(2) = 1e-24
 Identities = 35/91 (38%), Positives = 55/91 (60%)
 Frame = +1

Query: 199 ELDERVSSEKEVKDALGSGALAYTGIEDEDVEEEFKKLEMEPGDEILIKQIFETVADSSA 378
           EL+E + ++K+V+ AL S  ++  GIEDED+EEE +KLE+E   E L  QI +    +++
Sbjct: 330 ELEESIDAQKQVEKALESNPIS--GIEDEDIEEELEKLELELESENL--QISKVEVGNTS 385

Query: 379 VVQGSLVSASSADKILSNRKLDTGNSVNSLT 471
               +L S  S    LSN KL  G++  S++
Sbjct: 386 GEMDALGSPDSLTDALSNLKLHDGSARGSVS 416


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