BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028044
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278032.1| PREDICTED: 60S ribosomal protein L6 [Vitis v...   161   5e-38
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   160   8e-38
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   159   2e-37
ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   159   2e-37
ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   157   7e-37

>ref|XP_002278032.1| PREDICTED: 60S ribosomal protein L6 [Vitis vinifera]
          Length = 231

 Score =  161 bits (408), Expect = 5e-38
 Identities = 77/101 (76%), Positives = 83/101 (82%)
 Frame = +1

Query: 100 TSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPCHDXXXXXXXXXXXXXXFYPADD 279
           TSRNPDLIRG+GK+SRSKMYHKRGLWAIKAKNGGVFPCH+              FYPADD
Sbjct: 9   TSRNPDLIRGVGKFSRSKMYHKRGLWAIKAKNGGVFPCHEKKPVAPAPLEKLPKFYPADD 68

Query: 280 VKKPFVNKRKHQPTKLRVSITPGTVLIILAGRFQGKRVVFL 402
           VKKP +NK K +PTKLR SITPGTVLIILAGRF+GKRVVFL
Sbjct: 69  VKKPLINKHKAKPTKLRASITPGTVLIILAGRFKGKRVVFL 109


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/108 (75%), Positives = 84/108 (77%)
 Frame = +1

Query: 79  MALKARVTSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPCHDXXXXXXXXXXXXX 258
           MA K    SRNPDLIRG+GKYSRSKMYHKRGLWAIKAKNGGVFP HD             
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 259 XFYPADDVKKPFVNKRKHQPTKLRVSITPGTVLIILAGRFQGKRVVFL 402
            FYPADDVKKP VNKRK +PTKLR SITPGTVLIIL GRF+GKRVVFL
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFL 108


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/108 (74%), Positives = 84/108 (77%)
 Frame = +1

Query: 79  MALKARVTSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPCHDXXXXXXXXXXXXX 258
           MA K    SRNP+LIRG+GKYSRSKMYHKRGLWAIKAKNGGVFP HD             
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 259 XFYPADDVKKPFVNKRKHQPTKLRVSITPGTVLIILAGRFQGKRVVFL 402
            FYPADDVKKP VNKRK +PTKLR SITPGTVLIIL GRF+GKRVVFL
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFL 108


>ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/108 (74%), Positives = 84/108 (77%)
 Frame = +1

Query: 79  MALKARVTSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPCHDXXXXXXXXXXXXX 258
           MA K    SRNP+LIRG+GKYSRSKMYHKRGLWAIKAKNGGVFP HD             
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 259 XFYPADDVKKPFVNKRKHQPTKLRVSITPGTVLIILAGRFQGKRVVFL 402
            FYPADDVKKP VNKRK +PTKLR SITPGTVLIIL GRF+GKRVVFL
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFL 108


>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  157 bits (398), Expect = 7e-37
 Identities = 80/110 (72%), Positives = 86/110 (78%), Gaps = 2/110 (1%)
 Frame = +1

Query: 79  MALKARV--TSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPCHDXXXXXXXXXXX 252
           MA K R    +RNPDL+RGIGKYSRS+MYHKRGLWAIKAKNGGVFP HD           
Sbjct: 1   MAPKTRTPKVNRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEK 60

Query: 253 XXXFYPADDVKKPFVNKRKHQPTKLRVSITPGTVLIILAGRFQGKRVVFL 402
              FYPADDVKKP +NKRK +PTKLR SITPGTVLIILAGRF+GKRVVFL
Sbjct: 61  PPKFYPADDVKKPLLNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFL 110