BLASTX nr result

ID: Coptis23_contig00028043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028043
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267577.2| PREDICTED: auxin-induced protein 5NG4-like [...    72   6e-11
ref|XP_003633216.1| PREDICTED: auxin-induced protein 5NG4-like [...    70   2e-10
ref|XP_002518959.1| Auxin-induced protein 5NG4, putative [Ricinu...    67   2e-09
ref|XP_002271326.2| PREDICTED: auxin-induced protein 5NG4-like [...    64   1e-08
emb|CBI34636.3| unnamed protein product [Vitis vinifera]               64   1e-08

>ref|XP_002267577.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 345

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = +1

Query: 13  MYPAILSITAMASFFAALQTSVIAVFLCRNISNWKLKWD--LELLDIFLGGVLNCGLGSY 186
           +YPA +S+TAM SFF  +QT+++A F+  + S W+L+WD  L L+ + LGG++  GL  Y
Sbjct: 206 IYPAEISLTAMMSFFGTIQTAIVAAFVVSS-SAWELQWDGGLILITLLLGGIVVTGLSYY 264

Query: 187 AYIWSARKKGXXXXXXXXXXXXXXXXVLQWVILGNSMNVGSTVG 318
              WS   KG                +L   +LG+S ++GS VG
Sbjct: 265 VMTWSIGIKGPVFSASFNPLLVLFSFLLNTFVLGSSAHLGSIVG 308


>ref|XP_003633216.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 247

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
 Frame = +1

Query: 13  MYPAILSITAMASFFAALQTSVIAVFLCRNISNWKLKWD--LELLDIFLGGVLNCGLGSY 186
           +YPA +S+TAM SFF  +QT+++A F+  + S W+L+WD  L L  + LGG+   GL  Y
Sbjct: 108 IYPAEISLTAMMSFFGTIQTAIVAAFVVSS-SAWELQWDGGLVLTTLLLGGIAVTGLSYY 166

Query: 187 AYIWSARKKGXXXXXXXXXXXXXXXXVLQWVILGNSMNVGSTVG 318
              WS   KG                +L   +LG+S ++GS VG
Sbjct: 167 VMTWSIGIKGPVFSTSFNPLLVLFSFLLNTFVLGSSAHLGSIVG 210


>ref|XP_002518959.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223541946|gb|EEF43492.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 372

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/102 (34%), Positives = 52/102 (50%)
 Frame = +1

Query: 13  MYPAILSITAMASFFAALQTSVIAVFLCRNISNWKLKWDLELLDIFLGGVLNCGLGSYAY 192
           +YPA LS+T +  FFA++Q+SV+A+F  RN + WKL W+++LL I   GV+   L  Y  
Sbjct: 209 VYPARLSLTTLICFFASIQSSVLALFFGRNPTLWKLDWNVQLLTIIYCGVVISALVYYLQ 268

Query: 193 IWSARKKGXXXXXXXXXXXXXXXXVLQWVILGNSMNVGSTVG 318
            W   KKG                +   +     ++VGS  G
Sbjct: 269 TWCISKKGPVFAAMFSPLLLIIVGIFSAIAFAERLHVGSLTG 310


>ref|XP_002271326.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 357

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 50/102 (49%)
 Frame = +1

Query: 13  MYPAILSITAMASFFAALQTSVIAVFLCRNISNWKLKWDLELLDIFLGGVLNCGLGSYAY 192
           +YPA LS+  +  FFA+LQ+S +A+   RN   WKL+W+++L  I   GV+  GL  Y  
Sbjct: 201 VYPARLSLNVLICFFASLQSSFLALIFARNPVLWKLEWNVQLWTIIYSGVVGSGLVYYLQ 260

Query: 193 IWSARKKGXXXXXXXXXXXXXXXXVLQWVILGNSMNVGSTVG 318
            W   K+G                +   V     +++GS +G
Sbjct: 261 TWCINKRGPVFAAMFTPLQVITVGIFSAVAFAERLHLGSLIG 302


>emb|CBI34636.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 50/102 (49%)
 Frame = +1

Query: 13  MYPAILSITAMASFFAALQTSVIAVFLCRNISNWKLKWDLELLDIFLGGVLNCGLGSYAY 192
           +YPA LS+  +  FFA+LQ+S +A+   RN   WKL+W+++L  I   GV+  GL  Y  
Sbjct: 210 VYPARLSLNVLICFFASLQSSFLALIFARNPVLWKLEWNVQLWTIIYSGVVGSGLVYYLQ 269

Query: 193 IWSARKKGXXXXXXXXXXXXXXXXVLQWVILGNSMNVGSTVG 318
            W   K+G                +   V     +++GS +G
Sbjct: 270 TWCINKRGPVFAAMFTPLQVITVGIFSAVAFAERLHLGSLIG 311


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