BLASTX nr result

ID: Coptis23_contig00028036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028036
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU56981.1| importin alpha [Citrus sinensis]                       201   4e-50
ref|XP_002512528.1| importin alpha, putative [Ricinus communis] ...   201   4e-50
ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v...   200   9e-50
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]           197   6e-49

>gb|ACU56981.1| importin alpha [Citrus sinensis]
          Length = 535

 Score =  201 bits (512), Expect = 4e-50
 Identities = 104/151 (68%), Positives = 118/151 (78%), Gaps = 6/151 (3%)
 Frame = +2

Query: 2   YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREG------GAVXXXXXXXXXXXXXX 163
           YK+GVD DEARRRRE+NLVEIRKNKRED+LLKKRREG        +              
Sbjct: 16  YKTGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLLQPQQQLLDASQNAIEKKLES 75

Query: 164 XXVMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQLQ 343
              MVQGV+S++PALQL +TTQFRKLLSIE +PPI+EVI  GVVP+ VEFLGRHD+PQLQ
Sbjct: 76  IPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQ 135

Query: 344 FEAAWALTNIASGTSEHARAVIDHGAVPMFV 436
           FEAAWALTN+ASGTSEH R VI+HGAVPMFV
Sbjct: 136 FEAAWALTNVASGTSEHTRVVIEHGAVPMFV 166


>ref|XP_002512528.1| importin alpha, putative [Ricinus communis]
           gi|223548489|gb|EEF49980.1| importin alpha, putative
           [Ricinus communis]
          Length = 450

 Score =  201 bits (512), Expect = 4e-50
 Identities = 105/152 (69%), Positives = 118/152 (77%), Gaps = 7/152 (4%)
 Frame = +2

Query: 2   YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREGGAVXXXXXXXXXXXXXXXX---- 169
           YK+GVD DEARRRRE+NLVEIRKNKRED+LLKKRREG  +                    
Sbjct: 16  YKTGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLLQSQHLLDASQNADAVEKRLE 75

Query: 170 ---VMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQL 340
              VMVQGV+SD+PA QL +TTQFRKLLSIE +PPI+EVI  GVVP+ VEFLGRHDLPQL
Sbjct: 76  SIPVMVQGVWSDDPASQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDLPQL 135

Query: 341 QFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436
           QFEAAWALTN+ASGTSEH R VI+HGAVP+FV
Sbjct: 136 QFEAAWALTNVASGTSEHTRVVIEHGAVPLFV 167


>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  201 bits (511), Expect = 5e-50
 Identities = 104/154 (67%), Positives = 118/154 (76%), Gaps = 9/154 (5%)
 Frame = +2

Query: 2   YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREGGAVXXXXXXXXXXXXXXXXV--- 172
           YK+GVD DEARRRRE+NL+EIRKNKRED+LLKKRREG                   +   
Sbjct: 16  YKTGVDADEARRRREDNLLEIRKNKREDNLLKKRREGLLFQSQSQPLLDAAQHAANIEKK 75

Query: 173 ------MVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLP 334
                 MVQGV+SD+P+LQL +TTQFRKLLSIE +PPI++VI  GVVP+ VEFLGRHDLP
Sbjct: 76  LESLPMMVQGVWSDDPSLQLEATTQFRKLLSIERSPPIDDVIKAGVVPRFVEFLGRHDLP 135

Query: 335 QLQFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436
           QLQFEAAWALTN+ASGTSEH R VIDHGAVPMFV
Sbjct: 136 QLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFV 169


>ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296089795|emb|CBI39614.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score =  200 bits (509), Expect = 9e-50
 Identities = 104/153 (67%), Positives = 118/153 (77%), Gaps = 8/153 (5%)
 Frame = +2

Query: 2   YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREG--------GAVXXXXXXXXXXXX 157
           YK+GVD +EARRRRE+NLVEIRKNKRED+LLKKRREG         +             
Sbjct: 16  YKTGVDAEEARRRREDNLVEIRKNKREDNLLKKRREGLILQSQQFSSDASQTTAVVEKRL 75

Query: 158 XXXXVMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQ 337
               +MVQGV+SD+PA QL +TTQFRKLLSIE +PPI+EVI  GVVP+ VEFLGRHDLPQ
Sbjct: 76  ESITLMVQGVWSDDPASQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDLPQ 135

Query: 338 LQFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436
           LQFEAAWALTN+ASGTSEH R VI+HGAVPMFV
Sbjct: 136 LQFEAAWALTNVASGTSEHTRVVIEHGAVPMFV 168


>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score =  197 bits (502), Expect = 6e-49
 Identities = 103/153 (67%), Positives = 115/153 (75%), Gaps = 8/153 (5%)
 Frame = +2

Query: 2   YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREGGAVXXXXXXXXXXXXXXXX---- 169
           YK GVD DEARRRRE+NLVEIRKNKRED+LLKKRREG                       
Sbjct: 16  YKIGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLFHSQQQLPDAAQTPDAIEKRL 75

Query: 170 ----VMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQ 337
               VMVQGV+S++PA Q+ +TT FRKLLSIE +PPI+EVI  GV+P+ VEFLGRHDLPQ
Sbjct: 76  ESIPVMVQGVWSEDPAAQIEATTHFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDLPQ 135

Query: 338 LQFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436
           LQFEAAWALTN+ASGTSEH R VIDHGAVPMFV
Sbjct: 136 LQFEAAWALTNVASGTSEHTRVVIDHGAVPMFV 168


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