BLASTX nr result
ID: Coptis23_contig00028036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028036 (438 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACU56981.1| importin alpha [Citrus sinensis] 201 4e-50 ref|XP_002512528.1| importin alpha, putative [Ricinus communis] ... 201 4e-50 ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2... 201 5e-50 ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v... 200 9e-50 gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum] 197 6e-49 >gb|ACU56981.1| importin alpha [Citrus sinensis] Length = 535 Score = 201 bits (512), Expect = 4e-50 Identities = 104/151 (68%), Positives = 118/151 (78%), Gaps = 6/151 (3%) Frame = +2 Query: 2 YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREG------GAVXXXXXXXXXXXXXX 163 YK+GVD DEARRRRE+NLVEIRKNKRED+LLKKRREG + Sbjct: 16 YKTGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLLQPQQQLLDASQNAIEKKLES 75 Query: 164 XXVMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQLQ 343 MVQGV+S++PALQL +TTQFRKLLSIE +PPI+EVI GVVP+ VEFLGRHD+PQLQ Sbjct: 76 IPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQ 135 Query: 344 FEAAWALTNIASGTSEHARAVIDHGAVPMFV 436 FEAAWALTN+ASGTSEH R VI+HGAVPMFV Sbjct: 136 FEAAWALTNVASGTSEHTRVVIEHGAVPMFV 166 >ref|XP_002512528.1| importin alpha, putative [Ricinus communis] gi|223548489|gb|EEF49980.1| importin alpha, putative [Ricinus communis] Length = 450 Score = 201 bits (512), Expect = 4e-50 Identities = 105/152 (69%), Positives = 118/152 (77%), Gaps = 7/152 (4%) Frame = +2 Query: 2 YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREGGAVXXXXXXXXXXXXXXXX---- 169 YK+GVD DEARRRRE+NLVEIRKNKRED+LLKKRREG + Sbjct: 16 YKTGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLLQSQHLLDASQNADAVEKRLE 75 Query: 170 ---VMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQL 340 VMVQGV+SD+PA QL +TTQFRKLLSIE +PPI+EVI GVVP+ VEFLGRHDLPQL Sbjct: 76 SIPVMVQGVWSDDPASQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDLPQL 135 Query: 341 QFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436 QFEAAWALTN+ASGTSEH R VI+HGAVP+FV Sbjct: 136 QFEAAWALTNVASGTSEHTRVVIEHGAVPLFV 167 >ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1| predicted protein [Populus trichocarpa] Length = 537 Score = 201 bits (511), Expect = 5e-50 Identities = 104/154 (67%), Positives = 118/154 (76%), Gaps = 9/154 (5%) Frame = +2 Query: 2 YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREGGAVXXXXXXXXXXXXXXXXV--- 172 YK+GVD DEARRRRE+NL+EIRKNKRED+LLKKRREG + Sbjct: 16 YKTGVDADEARRRREDNLLEIRKNKREDNLLKKRREGLLFQSQSQPLLDAAQHAANIEKK 75 Query: 173 ------MVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLP 334 MVQGV+SD+P+LQL +TTQFRKLLSIE +PPI++VI GVVP+ VEFLGRHDLP Sbjct: 76 LESLPMMVQGVWSDDPSLQLEATTQFRKLLSIERSPPIDDVIKAGVVPRFVEFLGRHDLP 135 Query: 335 QLQFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436 QLQFEAAWALTN+ASGTSEH R VIDHGAVPMFV Sbjct: 136 QLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFV 169 >ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera] gi|296089795|emb|CBI39614.3| unnamed protein product [Vitis vinifera] Length = 535 Score = 200 bits (509), Expect = 9e-50 Identities = 104/153 (67%), Positives = 118/153 (77%), Gaps = 8/153 (5%) Frame = +2 Query: 2 YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREG--------GAVXXXXXXXXXXXX 157 YK+GVD +EARRRRE+NLVEIRKNKRED+LLKKRREG + Sbjct: 16 YKTGVDAEEARRRREDNLVEIRKNKREDNLLKKRREGLILQSQQFSSDASQTTAVVEKRL 75 Query: 158 XXXXVMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQ 337 +MVQGV+SD+PA QL +TTQFRKLLSIE +PPI+EVI GVVP+ VEFLGRHDLPQ Sbjct: 76 ESITLMVQGVWSDDPASQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDLPQ 135 Query: 338 LQFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436 LQFEAAWALTN+ASGTSEH R VI+HGAVPMFV Sbjct: 136 LQFEAAWALTNVASGTSEHTRVVIEHGAVPMFV 168 >gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum] Length = 535 Score = 197 bits (502), Expect = 6e-49 Identities = 103/153 (67%), Positives = 115/153 (75%), Gaps = 8/153 (5%) Frame = +2 Query: 2 YKSGVDGDEARRRREENLVEIRKNKREDSLLKKRREGGAVXXXXXXXXXXXXXXXX---- 169 YK GVD DEARRRRE+NLVEIRKNKRED+LLKKRREG Sbjct: 16 YKIGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLFHSQQQLPDAAQTPDAIEKRL 75 Query: 170 ----VMVQGVFSDNPALQLGSTTQFRKLLSIEHNPPIEEVINVGVVPKIVEFLGRHDLPQ 337 VMVQGV+S++PA Q+ +TT FRKLLSIE +PPI+EVI GV+P+ VEFLGRHDLPQ Sbjct: 76 ESIPVMVQGVWSEDPAAQIEATTHFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDLPQ 135 Query: 338 LQFEAAWALTNIASGTSEHARAVIDHGAVPMFV 436 LQFEAAWALTN+ASGTSEH R VIDHGAVPMFV Sbjct: 136 LQFEAAWALTNVASGTSEHTRVVIDHGAVPMFV 168