BLASTX nr result

ID: Coptis23_contig00028035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028035
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223...   147   9e-34
ref|XP_002319678.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [...   145   4e-33
ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
emb|CAN79713.1| hypothetical protein VITISV_027502 [Vitis vinifera]   144   1e-32

>ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223535285|gb|EEF36962.1|
           syntaxin, putative [Ricinus communis]
          Length = 313

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/114 (64%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
 Frame = -2

Query: 341 KSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLEGAETVKTEMASIRDILG 165
           KSF SYVDLKKEAM+DLEAGPD  +EM NA+N ++ NL LFLE AE VK EM SIRD+L 
Sbjct: 7   KSFTSYVDLKKEAMRDLEAGPDPDLEMANASNTMDRNLGLFLEEAENVKKEMESIRDVLV 66

Query: 164 RLQDASEESKSVHRPDSLKALRSRINADILSVLKKARTIRVRIEDMDQANEVNR 3
           RLQ+++EESKS+H+P++LK LR++INADI++V KKAR I+ ++E+MD+AN  NR
Sbjct: 67  RLQESNEESKSLHKPEALKLLRNKINADIVTVQKKARAIKTQLEEMDRANAANR 120


>ref|XP_002319678.1| predicted protein [Populus trichocarpa] gi|222858054|gb|EEE95601.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/114 (64%), Positives = 98/114 (85%), Gaps = 1/114 (0%)
 Frame = -2

Query: 341 KSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLEGAETVKTEMASIRDILG 165
           KSF+SYVDLKKEAMKDLEAGPD  VEM NA+N +E NL +FLE AE VK EM SIR+IL 
Sbjct: 7   KSFMSYVDLKKEAMKDLEAGPDPVVEMANASNTMESNLGMFLEEAENVKKEMGSIREILD 66

Query: 164 RLQDASEESKSVHRPDSLKALRSRINADILSVLKKARTIRVRIEDMDQANEVNR 3
           +LQ+A+EESK++H+P++LK+LR++IN DI++V KKAR+I+ ++E+MD+AN  NR
Sbjct: 67  QLQEANEESKTLHKPEALKSLRNKINTDIVTVQKKARSIKSQLEEMDRANAANR 120


>ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [Vitis vinifera]
          Length = 311

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/112 (64%), Positives = 94/112 (83%)
 Frame = -2

Query: 341 KSFVSYVDLKKEAMKDLEAGPDYSVEMTNATNVEPNLALFLEGAETVKTEMASIRDILGR 162
           KSF+SYVDLKKEAMKDLEAGP+Y ++M+  T ++ NL LFLE AE VK EM  IR+ILGR
Sbjct: 7   KSFISYVDLKKEAMKDLEAGPEYDLQMSG-TQMDRNLGLFLEEAEKVKQEMGLIREILGR 65

Query: 161 LQDASEESKSVHRPDSLKALRSRINADILSVLKKARTIRVRIEDMDQANEVN 6
           L +A+EESKS+H+P++LK+LR+RINADI+ V KKAR I+ ++E+MD+AN  N
Sbjct: 66  LHEANEESKSLHKPEALKSLRNRINADIIGVQKKARAIKSQLEEMDRANAAN 117


>ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|222862697|gb|EEF00204.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/114 (63%), Positives = 98/114 (85%), Gaps = 1/114 (0%)
 Frame = -2

Query: 341 KSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLEGAETVKTEMASIRDILG 165
           KSF+SYVDLKKEAMKDLEAGPD+ +EM NA+N ++ NL LFLE AE VK +M SIR+IL 
Sbjct: 7   KSFMSYVDLKKEAMKDLEAGPDHDLEMANASNTMDSNLGLFLEEAEDVKKKMRSIREILD 66

Query: 164 RLQDASEESKSVHRPDSLKALRSRINADILSVLKKARTIRVRIEDMDQANEVNR 3
           +LQ+A+EESKS+H+ ++LK++R++INADI+  LKKAR+I+ ++E+MD+AN  NR
Sbjct: 67  QLQEANEESKSLHKHEALKSIRNKINADIVKGLKKARSIKTQLEEMDRANAANR 120


>emb|CAN79713.1| hypothetical protein VITISV_027502 [Vitis vinifera]
          Length = 298

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/112 (64%), Positives = 93/112 (83%)
 Frame = -2

Query: 341 KSFVSYVDLKKEAMKDLEAGPDYSVEMTNATNVEPNLALFLEGAETVKTEMASIRDILGR 162
           KSF SYVDLKKEAMKDLEAGP+Y ++M+  T ++ NL LFLE AE VK EM  IR+ILGR
Sbjct: 7   KSFTSYVDLKKEAMKDLEAGPEYDLQMSG-TQMDRNLGLFLEEAEKVKQEMGLIREILGR 65

Query: 161 LQDASEESKSVHRPDSLKALRSRINADILSVLKKARTIRVRIEDMDQANEVN 6
           L +A+EESKS+H+P++LK+LR+RINADI+ V KKAR I+ ++E+MD+AN  N
Sbjct: 66  LHEANEESKSLHKPEALKSLRNRINADIIGVQKKARAIKSQLEEMDRANAAN 117


Top