BLASTX nr result

ID: Coptis23_contig00028023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028023
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34251.1| unnamed protein product [Thellungiella halophila]     202   3e-68
ref|NP_196353.2| Amidase family protein [Arabidopsis thaliana] g...   201   6e-68
emb|CAB87925.1| putative amidase [Arabidopsis thaliana]               201   6e-68
emb|CAA71371.1| putative amidase [Arabidopsis thaliana]               201   6e-68
ref|XP_002873306.1| amidase family protein [Arabidopsis lyrata s...   198   5e-67

>dbj|BAJ34251.1| unnamed protein product [Thellungiella halophila]
          Length = 663

 Score =  202 bits (515), Expect(2) = 3e-68
 Identities = 97/132 (73%), Positives = 109/132 (82%)
 Frame = +3

Query: 3   YGLKDIISVPHYKTTWGSTTFKDQVLDIEAWVYKRLRSAGAVLIVKLVTRSLAYDDIWFG 182
           YGLKDI++VP YKTTWGST+FKDQVLDIEAWVYKRL+++GAVL+ KLV+ SLAYDDIWFG
Sbjct: 277 YGLKDIVAVPGYKTTWGSTSFKDQVLDIEAWVYKRLKASGAVLVAKLVSGSLAYDDIWFG 336

Query: 183 GRTRNPWNVEELCXXXXXXXXXXXXXXLVAFAIGSETAGSMTYPAGRCGVTALRSTFGTA 362
           GRTRNPWN+EE                +V FAIGSETAGSMTYPA RCGVTALR TFG+ 
Sbjct: 337 GRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSETAGSMTYPAARCGVTALRPTFGSV 396

Query: 363 GRSGVMSISESL 398
           GR+GVMSISESL
Sbjct: 397 GRTGVMSISESL 408



 Score = 83.2 bits (204), Expect(2) = 3e-68
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 409 DCAVVLDAIRGRDPDDLSSREILIEDPFSIDIRKLTVGYPEDADMEVV 552
           DCAVVLDAI+G+DP+DLSSRE+  EDPFS+DI KLTVGY +DADMEVV
Sbjct: 420 DCAVVLDAIKGKDPEDLSSRELAFEDPFSVDITKLTVGYTKDADMEVV 467


>ref|NP_196353.2| Amidase family protein [Arabidopsis thaliana]
           gi|332003759|gb|AED91142.1| Amidase family protein
           [Arabidopsis thaliana]
          Length = 659

 Score =  201 bits (511), Expect(2) = 6e-68
 Identities = 95/132 (71%), Positives = 108/132 (81%)
 Frame = +3

Query: 3   YGLKDIISVPHYKTTWGSTTFKDQVLDIEAWVYKRLRSAGAVLIVKLVTRSLAYDDIWFG 182
           YGLKDI++VP YKTTWGST+FKDQ LDIEAWVYKRL+++GAVL+ KLVT S+AYDDIWFG
Sbjct: 273 YGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAKLVTGSMAYDDIWFG 332

Query: 183 GRTRNPWNVEELCXXXXXXXXXXXXXXLVAFAIGSETAGSMTYPAGRCGVTALRSTFGTA 362
           GRTRNPWN+EE                +V FAIGSETAGSMTYPA RCG+TALR TFG+ 
Sbjct: 333 GRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSETAGSMTYPAARCGITALRPTFGSV 392

Query: 363 GRSGVMSISESL 398
           GR+GVMSISESL
Sbjct: 393 GRTGVMSISESL 404



 Score = 83.6 bits (205), Expect(2) = 6e-68
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 409 DCAVVLDAIRGRDPDDLSSREILIEDPFSIDIRKLTVGYPEDADMEVV 552
           DCAV+LDAI+G+DPDDLSSREI  EDPFS+DI KLTVGY +DADM+VV
Sbjct: 416 DCAVILDAIKGKDPDDLSSREIAFEDPFSVDITKLTVGYTKDADMKVV 463


>emb|CAB87925.1| putative amidase [Arabidopsis thaliana]
          Length = 657

 Score =  201 bits (511), Expect(2) = 6e-68
 Identities = 95/132 (71%), Positives = 108/132 (81%)
 Frame = +3

Query: 3   YGLKDIISVPHYKTTWGSTTFKDQVLDIEAWVYKRLRSAGAVLIVKLVTRSLAYDDIWFG 182
           YGLKDI++VP YKTTWGST+FKDQ LDIEAWVYKRL+++GAVL+ KLVT S+AYDDIWFG
Sbjct: 271 YGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAKLVTGSMAYDDIWFG 330

Query: 183 GRTRNPWNVEELCXXXXXXXXXXXXXXLVAFAIGSETAGSMTYPAGRCGVTALRSTFGTA 362
           GRTRNPWN+EE                +V FAIGSETAGSMTYPA RCG+TALR TFG+ 
Sbjct: 331 GRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSETAGSMTYPAARCGITALRPTFGSV 390

Query: 363 GRSGVMSISESL 398
           GR+GVMSISESL
Sbjct: 391 GRTGVMSISESL 402



 Score = 83.6 bits (205), Expect(2) = 6e-68
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 409 DCAVVLDAIRGRDPDDLSSREILIEDPFSIDIRKLTVGYPEDADMEVV 552
           DCAV+LDAI+G+DPDDLSSREI  EDPFS+DI KLTVGY +DADM+VV
Sbjct: 414 DCAVILDAIKGKDPDDLSSREIAFEDPFSVDITKLTVGYTKDADMKVV 461


>emb|CAA71371.1| putative amidase [Arabidopsis thaliana]
          Length = 457

 Score =  201 bits (511), Expect(2) = 6e-68
 Identities = 95/132 (71%), Positives = 108/132 (81%)
 Frame = +3

Query: 3   YGLKDIISVPHYKTTWGSTTFKDQVLDIEAWVYKRLRSAGAVLIVKLVTRSLAYDDIWFG 182
           YGLKDI++VP YKTTWGST+FKDQ LDIEAWVYKRL+++GAVL+ KLVT S+AYDDIWFG
Sbjct: 71  YGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAKLVTGSMAYDDIWFG 130

Query: 183 GRTRNPWNVEELCXXXXXXXXXXXXXXLVAFAIGSETAGSMTYPAGRCGVTALRSTFGTA 362
           GRTRNPWN+EE                +V FAIGSETAGSMTYPA RCG+TALR TFG+ 
Sbjct: 131 GRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSETAGSMTYPAARCGITALRPTFGSV 190

Query: 363 GRSGVMSISESL 398
           GR+GVMSISESL
Sbjct: 191 GRTGVMSISESL 202



 Score = 83.6 bits (205), Expect(2) = 6e-68
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 409 DCAVVLDAIRGRDPDDLSSREILIEDPFSIDIRKLTVGYPEDADMEVV 552
           DCAV+LDAI+G+DPDDLSSREI  EDPFS+DI KLTVGY +DADM+VV
Sbjct: 214 DCAVILDAIKGKDPDDLSSREIAFEDPFSVDITKLTVGYTKDADMKVV 261


>ref|XP_002873306.1| amidase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319143|gb|EFH49565.1| amidase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 622

 Score =  198 bits (503), Expect(2) = 5e-67
 Identities = 94/132 (71%), Positives = 107/132 (81%)
 Frame = +3

Query: 3   YGLKDIISVPHYKTTWGSTTFKDQVLDIEAWVYKRLRSAGAVLIVKLVTRSLAYDDIWFG 182
           YGLKD I+VP Y+TTWGST+FKDQVLDIEAWVYKRL+++GAVL+ KLV  S+AYDDIWFG
Sbjct: 236 YGLKDTIAVPRYRTTWGSTSFKDQVLDIEAWVYKRLKASGAVLVAKLVAGSMAYDDIWFG 295

Query: 183 GRTRNPWNVEELCXXXXXXXXXXXXXXLVAFAIGSETAGSMTYPAGRCGVTALRSTFGTA 362
           GRTRNPWN+EE                +V FAIGSETAGS+TYPA RCGVTALR TFG+ 
Sbjct: 296 GRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSETAGSITYPAARCGVTALRPTFGSV 355

Query: 363 GRSGVMSISESL 398
           GR+GVMSISESL
Sbjct: 356 GRTGVMSISESL 367



 Score = 83.6 bits (205), Expect(2) = 5e-67
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 409 DCAVVLDAIRGRDPDDLSSREILIEDPFSIDIRKLTVGYPEDADMEVV 552
           DCAV+LDAI+G+DPDDLSSREI  EDPFS+DI KLTVGY +DADM+VV
Sbjct: 379 DCAVILDAIKGKDPDDLSSREIAFEDPFSVDITKLTVGYTKDADMKVV 426


Top