BLASTX nr result

ID: Coptis23_contig00028022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028022
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513771.1| conserved hypothetical protein [Ricinus comm...   181   1e-43
ref|XP_002302252.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
emb|CBI19060.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254...   167   1e-39

>ref|XP_002513771.1| conserved hypothetical protein [Ricinus communis]
           gi|223546857|gb|EEF48354.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 471

 Score =  181 bits (458), Expect = 1e-43
 Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 3/191 (1%)
 Frame = -2

Query: 564 WLGFVFKGDISHVSEHLAIXXXXXXXXXXXXXXSWNQNMLDLSVKGQWLQAVAGICFGLL 385
           W G VFKGDI+ +S++LAI               WNQ MLDL V+G W+ AV G   GL 
Sbjct: 205 WWGVVFKGDIASISDYLAIGLTTGYLGSLTTFSGWNQKMLDLIVEGHWVFAVVGFLIGLF 264

Query: 384 IAAGSIRFGIFTSKGFRCVL---NRFPTSSRNKFRMESLKQHITVLLVLVSIRALSWGLS 214
           +AA SI+FGI T+K F+ +L   N+  T +R+ +R++S K+H+ V+  LV +  + W +S
Sbjct: 265 LAAYSIKFGIGTAKCFKSLLQRSNKTETKTRSNWRVDSCKRHLAVMAALVLMLGILWSVS 324

Query: 213 GSLLRKWLDGGDTNGQLWLACIAAPPGVWARWFLAXXXXXXXXXXGSFKWIPFGTLIANV 34
           G++L+K  + G +  QLWLAC+ A PGVW RWFLA          G  KW+PFGTLIANV
Sbjct: 325 GTMLKKEFNSGSSGAQLWLACLVAAPGVWIRWFLARLNGRGLGKAGYLKWVPFGTLIANV 384

Query: 33  SAACVMAALAT 1
           SAA +MAALAT
Sbjct: 385 SAASIMAALAT 395


>ref|XP_002302252.1| predicted protein [Populus trichocarpa] gi|222843978|gb|EEE81525.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  174 bits (442), Expect = 7e-42
 Identities = 93/189 (49%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 WLGFVFKGDISHVSEHLAIXXXXXXXXXXXXXXSWNQNMLDLSVKGQWLQAVAGICFGLL 385
           W G VFKGDIS VS+HLAI               WNQ MLDLSV G W+ +  G   GL 
Sbjct: 198 WWGVVFKGDISRVSDHLAIGLTTGYLGSLTTFSGWNQKMLDLSVDGHWVFSFVGFLIGLF 257

Query: 384 IAAGSIRFGIFTSKGFRCVLNRFPTSSRNK-FRMESLKQHITVLLVLVSIRALSWGLSGS 208
           +AA +I+ G+ T+K F+  L R   SS    +R+++   H+ VL+VLV I  L W +S +
Sbjct: 258 LAAYAIKLGVGTAKCFKSFLERSNRSSDLAGWRVDNCYHHLGVLVVLVVILGLLWSVSWA 317

Query: 207 LLRKWLDGGDTNGQLWLACIAAPPGVWARWFLAXXXXXXXXXXGSFKWIPFGTLIANVSA 28
           +L+K  +      QLWLACI APPGVW RWFLA          GS KW+PFGTLIANVSA
Sbjct: 318 MLKKEYNHDSGGAQLWLACIVAPPGVWIRWFLARLNGRGLGKAGSLKWVPFGTLIANVSA 377

Query: 27  ACVMAALAT 1
           AC+MAAL+T
Sbjct: 378 ACIMAALST 386


>ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|222856067|gb|EEE93614.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  170 bits (430), Expect = 2e-40
 Identities = 91/189 (48%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 WLGFVFKGDISHVSEHLAIXXXXXXXXXXXXXXSWNQNMLDLSVKGQWLQAVAGICFGLL 385
           W G VFK DIS VS HLAI               WNQ MLDLSV G W+ +  G   GL 
Sbjct: 206 WWGVVFKEDISKVSGHLAIGLTTGYLGSLTTFSGWNQKMLDLSVSGHWVFSFVGFLIGLF 265

Query: 384 IAAGSIRFGIFTSKGFRCVLNRFPTSSR-NKFRMESLKQHITVLLVLVSIRALSWGLSGS 208
           +AA SI+FG+ T+K F+ +  R   S+    +R+++   H  V++VLV +  L W LSG+
Sbjct: 266 LAAYSIKFGVGTAKCFKSLFQRSNRSADLASWRVDTPNHHFAVMVVLVVMLGLLWALSGA 325

Query: 207 LLRKWLDGGDTNGQLWLACIAAPPGVWARWFLAXXXXXXXXXXGSFKWIPFGTLIANVSA 28
           LL++  +   +  QLWL CI AP GVW RWFLA          GS KWIPFGTLIANVSA
Sbjct: 326 LLKEEYNHDSSGAQLWLGCIVAPLGVWIRWFLARLNGRGLGKAGSLKWIPFGTLIANVSA 385

Query: 27  ACVMAALAT 1
           AC+MAAL+T
Sbjct: 386 ACIMAALST 394


>emb|CBI19060.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  167 bits (422), Expect = 1e-39
 Identities = 91/195 (46%), Positives = 115/195 (58%), Gaps = 7/195 (3%)
 Frame = -2

Query: 564 WLGFVFKGDISHVSEHLAIXXXXXXXXXXXXXXSWNQNMLDLSVKGQWLQAVAGICFGLL 385
           W G VFKGDIS VS+ LAI               WNQ MLDLSV GQW+ +V G   GL 
Sbjct: 258 WWGVVFKGDISSVSDQLAIGLTTGYLGSLTTFSGWNQKMLDLSVDGQWVFSVLGFLIGLF 317

Query: 384 IAAGSIRFGIFTSKGFRCVLNRFPTS-------SRNKFRMESLKQHITVLLVLVSIRALS 226
           +AA SI FG+ T+KGFR +L R  +        S   +R++S K+H+ V++V + I  L 
Sbjct: 318 LAAYSIIFGVETAKGFRWLLKRLNSGGKRGILRSNGNWRVDSCKRHLAVMVVGMLILGLL 377

Query: 225 WGLSGSLLRKWLDGGDTNGQLWLACIAAPPGVWARWFLAXXXXXXXXXXGSFKWIPFGTL 46
           + L G L ++    G +  QLWL C+ AP GVW RW+LA          G FKW+PFGTL
Sbjct: 378 YSLCGILEKREFQSGSSEAQLWLGCMVAPLGVWIRWWLARFNGRGLGKAGLFKWVPFGTL 437

Query: 45  IANVSAACVMAALAT 1
           IANVSAA VMA L+T
Sbjct: 438 IANVSAASVMAGLST 452


>ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254107 [Vitis vinifera]
          Length = 510

 Score =  167 bits (422), Expect = 1e-39
 Identities = 91/195 (46%), Positives = 115/195 (58%), Gaps = 7/195 (3%)
 Frame = -2

Query: 564 WLGFVFKGDISHVSEHLAIXXXXXXXXXXXXXXSWNQNMLDLSVKGQWLQAVAGICFGLL 385
           W G VFKGDIS VS+ LAI               WNQ MLDLSV GQW+ +V G   GL 
Sbjct: 240 WWGVVFKGDISSVSDQLAIGLTTGYLGSLTTFSGWNQKMLDLSVDGQWVFSVLGFLIGLF 299

Query: 384 IAAGSIRFGIFTSKGFRCVLNRFPTS-------SRNKFRMESLKQHITVLLVLVSIRALS 226
           +AA SI FG+ T+KGFR +L R  +        S   +R++S K+H+ V++V + I  L 
Sbjct: 300 LAAYSIIFGVETAKGFRWLLKRLNSGGKRGILRSNGNWRVDSCKRHLAVMVVGMLILGLL 359

Query: 225 WGLSGSLLRKWLDGGDTNGQLWLACIAAPPGVWARWFLAXXXXXXXXXXGSFKWIPFGTL 46
           + L G L ++    G +  QLWL C+ AP GVW RW+LA          G FKW+PFGTL
Sbjct: 360 YSLCGILEKREFQSGSSEAQLWLGCMVAPLGVWIRWWLARFNGRGLGKAGLFKWVPFGTL 419

Query: 45  IANVSAACVMAALAT 1
           IANVSAA VMA L+T
Sbjct: 420 IANVSAASVMAGLST 434


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