BLASTX nr result

ID: Coptis23_contig00028021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028021
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19060.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254...   150   1e-34
ref|NP_565956.1| camphor resistance CrcB-like protein [Arabidops...   149   3e-34
ref|XP_002879949.1| camphor resistance CrcB family protein [Arab...   149   3e-34
ref|XP_004140387.1| PREDICTED: UPF0695 membrane protein YPL279C-...   147   7e-34

>emb|CBI19060.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/99 (69%), Positives = 85/99 (85%)
 Frame = +2

Query: 2   QTFVYIDLPSNLVGSFLMGWLGVVFKGDISRVSDLVAVGFTTGYLGSLTTFSAWNQKMLD 181
           Q+ +Y+DLPSN+ GSFLMGW GVVFKGDIS VSD +A+G TTGYLGSLTTFS WNQKMLD
Sbjct: 239 QSILYLDLPSNMAGSFLMGWWGVVFKGDISSVSDQLAIGLTTGYLGSLTTFSGWNQKMLD 298

Query: 182 LSVNNQWLQAIVGILLGLWMADGSIHVGIETAKGFRWLV 298
           LSV+ QW+ +++G L+GL++A  SI  G+ETAKGFRWL+
Sbjct: 299 LSVDGQWVFSVLGFLIGLFLAAYSIIFGVETAKGFRWLL 337


>ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254107 [Vitis vinifera]
          Length = 510

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/99 (69%), Positives = 85/99 (85%)
 Frame = +2

Query: 2   QTFVYIDLPSNLVGSFLMGWLGVVFKGDISRVSDLVAVGFTTGYLGSLTTFSAWNQKMLD 181
           Q+ +Y+DLPSN+ GSFLMGW GVVFKGDIS VSD +A+G TTGYLGSLTTFS WNQKMLD
Sbjct: 221 QSILYLDLPSNMAGSFLMGWWGVVFKGDISSVSDQLAIGLTTGYLGSLTTFSGWNQKMLD 280

Query: 182 LSVNNQWLQAIVGILLGLWMADGSIHVGIETAKGFRWLV 298
           LSV+ QW+ +++G L+GL++A  SI  G+ETAKGFRWL+
Sbjct: 281 LSVDGQWVFSVLGFLIGLFLAAYSIIFGVETAKGFRWLL 319


>ref|NP_565956.1| camphor resistance CrcB-like protein [Arabidopsis thaliana]
           gi|238479528|ref|NP_001154568.1| camphor resistance
           CrcB-like protein [Arabidopsis thaliana]
           gi|20196897|gb|AAM14827.1| Expressed protein
           [Arabidopsis thaliana] gi|26453266|dbj|BAC43706.1|
           unknown protein [Arabidopsis thaliana]
           gi|330254925|gb|AEC10019.1| camphor resistance CrcB-like
           protein [Arabidopsis thaliana]
           gi|330254926|gb|AEC10020.1| camphor resistance CrcB-like
           protein [Arabidopsis thaliana]
          Length = 461

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/99 (66%), Positives = 85/99 (85%)
 Frame = +2

Query: 5   TFVYIDLPSNLVGSFLMGWLGVVFKGDISRVSDLVAVGFTTGYLGSLTTFSAWNQKMLDL 184
           + +Y+DLPSN+VGSFLMGW GVVFK DI+RVS+ VA+G +TGYLGSLTTFS WNQKMLDL
Sbjct: 177 SILYLDLPSNMVGSFLMGWFGVVFKADIARVSEFVAIGLSTGYLGSLTTFSGWNQKMLDL 236

Query: 185 SVNNQWLQAIVGILLGLWMADGSIHVGIETAKGFRWLVN 301
           S + QW+ A++G LLGL++   SI +G+ETAKGF+WL++
Sbjct: 237 SADGQWVYAVLGFLLGLFLTSYSIILGVETAKGFKWLLH 275


>ref|XP_002879949.1| camphor resistance CrcB family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325788|gb|EFH56208.1| camphor resistance
           CrcB family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 462

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/99 (66%), Positives = 85/99 (85%)
 Frame = +2

Query: 5   TFVYIDLPSNLVGSFLMGWLGVVFKGDISRVSDLVAVGFTTGYLGSLTTFSAWNQKMLDL 184
           + +Y+DLPSN+VGSFLMGW GVVFK DI+RVS+ VA+G +TGYLGSLTTFS WNQKMLDL
Sbjct: 178 SILYLDLPSNMVGSFLMGWFGVVFKADIARVSEFVAIGLSTGYLGSLTTFSGWNQKMLDL 237

Query: 185 SVNNQWLQAIVGILLGLWMADGSIHVGIETAKGFRWLVN 301
           S + QW+ A++G LLGL++   SI +G+ETAKGF+WL++
Sbjct: 238 SADGQWVYAVLGFLLGLFLTSYSIILGVETAKGFKWLLH 276


>ref|XP_004140387.1| PREDICTED: UPF0695 membrane protein YPL279C-like [Cucumis sativus]
           gi|449502484|ref|XP_004161653.1| PREDICTED: UPF0695
           membrane protein YPL279C-like [Cucumis sativus]
          Length = 596

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/98 (70%), Positives = 82/98 (83%)
 Frame = +2

Query: 5   TFVYIDLPSNLVGSFLMGWLGVVFKGDISRVSDLVAVGFTTGYLGSLTTFSAWNQKMLDL 184
           T +Y DLPSN+VGSFLMGW GVVFKGDIS +SD +A+G TTGYLGSLTTFS WNQKMLDL
Sbjct: 318 TILYPDLPSNMVGSFLMGWWGVVFKGDISEISDYLAIGLTTGYLGSLTTFSGWNQKMLDL 377

Query: 185 SVNNQWLQAIVGILLGLWMADGSIHVGIETAKGFRWLV 298
           S++  WL AI+G L+GL++   SI  GIETAKGFRW++
Sbjct: 378 SLDGHWLFAILGFLIGLFLVAYSIIFGIETAKGFRWIL 415


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