BLASTX nr result

ID: Coptis23_contig00028019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028019
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]   127   7e-28
ref|XP_002268837.2| PREDICTED: glutamate receptor 2.7-like, part...   125   4e-27
emb|CBI23973.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002271672.2| PREDICTED: glutamate receptor 2.8-like [Viti...   124   8e-27
emb|CBI23997.3| unnamed protein product [Vitis vinifera]              124   8e-27

>emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]
          Length = 978

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/96 (64%), Positives = 78/96 (81%)
 Frame = -3

Query: 288 IQDVNSHVPYRSVLCSSPTDVQIRGELYKLMTMQTRVFVVHMSTSLGSRLFSIANELRMM 109
           +Q ++ HV YRSV+  S TD QI  ELYKLMTMQTRVF+VHM T LGSR F+ A+E+ MM
Sbjct: 191 LQGIDVHVTYRSVISPSATDDQIGEELYKLMTMQTRVFIVHMVTPLGSRFFTKADEIGMM 250

Query: 108 SKGYVWIITDGLTDLLSSMNSSIVESMQGVLGIKAY 1
            +GYVWI+TDGLTDLLS+M+  +++SMQGVLGIK +
Sbjct: 251 EEGYVWILTDGLTDLLSTMDPLVIDSMQGVLGIKPH 286


>ref|XP_002268837.2| PREDICTED: glutamate receptor 2.7-like, partial [Vitis vinifera]
          Length = 953

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/96 (62%), Positives = 78/96 (81%)
 Frame = -3

Query: 288 IQDVNSHVPYRSVLCSSPTDVQIRGELYKLMTMQTRVFVVHMSTSLGSRLFSIANELRMM 109
           +Q+V++HV YRS +  S TD QI  ELYKLMTM TRVF+VHM T LGSRLF+ ANE+ MM
Sbjct: 169 LQEVDTHVTYRSAIHLSATDDQIVKELYKLMTMSTRVFIVHMFTPLGSRLFTKANEVGMM 228

Query: 108 SKGYVWIITDGLTDLLSSMNSSIVESMQGVLGIKAY 1
            +GYVWI+TDG+TD LS+++ S ++SMQGVLG+K +
Sbjct: 229 EEGYVWILTDGMTDFLSTLDPSAIDSMQGVLGVKPH 264


>emb|CBI23973.3| unnamed protein product [Vitis vinifera]
          Length = 1842

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/96 (62%), Positives = 78/96 (81%)
 Frame = -3

Query: 288 IQDVNSHVPYRSVLCSSPTDVQIRGELYKLMTMQTRVFVVHMSTSLGSRLFSIANELRMM 109
           +Q+V++HV YRS +  S TD QI  ELYKLMTM TRVF+VHM T LGSRLF+ ANE+ MM
Sbjct: 82  LQEVDTHVTYRSAIHLSATDDQIVKELYKLMTMSTRVFIVHMFTPLGSRLFTKANEVGMM 141

Query: 108 SKGYVWIITDGLTDLLSSMNSSIVESMQGVLGIKAY 1
            +GYVWI+TDG+TD LS+++ S ++SMQGVLG+K +
Sbjct: 142 EEGYVWILTDGMTDFLSTLDPSAIDSMQGVLGVKPH 177



 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/96 (56%), Positives = 75/96 (78%)
 Frame = -3

Query: 288  IQDVNSHVPYRSVLCSSPTDVQIRGELYKLMTMQTRVFVVHMSTSLGSRLFSIANELRMM 109
            +Q++++ + YRSV+    TD QI  ELYKLMTM TRVF+VHM   +G RLF  ANE+ MM
Sbjct: 1030 LQEIDTRISYRSVIHPLATDDQILEELYKLMTMPTRVFIVHMFAPIGPRLFVRANEIGMM 1089

Query: 108  SKGYVWIITDGLTDLLSSMNSSIVESMQGVLGIKAY 1
             +GYVWI+TDGLTD+L +++ S+++SMQGVLG+K +
Sbjct: 1090 EEGYVWILTDGLTDILGTLDPSVIDSMQGVLGVKPH 1125


>ref|XP_002271672.2| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 1270

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/96 (61%), Positives = 78/96 (81%)
 Frame = -3

Query: 288 IQDVNSHVPYRSVLCSSPTDVQIRGELYKLMTMQTRVFVVHMSTSLGSRLFSIANELRMM 109
           +Q+V++HV YRS +  S TD QI  ELYKLMTM TRVF+VHM T LGS+LF+ ANE  MM
Sbjct: 164 LQEVDTHVTYRSAIHPSATDDQIVKELYKLMTMSTRVFIVHMLTPLGSQLFTKANEAGMM 223

Query: 108 SKGYVWIITDGLTDLLSSMNSSIVESMQGVLGIKAY 1
            +GYVWI+TDG+TD LS++++S ++SMQGVLG+K +
Sbjct: 224 EEGYVWILTDGITDFLSTLDASAIDSMQGVLGVKPH 259


>emb|CBI23997.3| unnamed protein product [Vitis vinifera]
          Length = 1316

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/96 (61%), Positives = 78/96 (81%)
 Frame = -3

Query: 288 IQDVNSHVPYRSVLCSSPTDVQIRGELYKLMTMQTRVFVVHMSTSLGSRLFSIANELRMM 109
           +Q+V++HV YRS +  S TD QI  ELYKLMTM TRVF+VHM T LGS+LF+ ANE  MM
Sbjct: 164 LQEVDTHVTYRSAIHPSATDDQIVKELYKLMTMSTRVFIVHMLTPLGSQLFTKANEAGMM 223

Query: 108 SKGYVWIITDGLTDLLSSMNSSIVESMQGVLGIKAY 1
            +GYVWI+TDG+TD LS++++S ++SMQGVLG+K +
Sbjct: 224 EEGYVWILTDGITDFLSTLDASAIDSMQGVLGVKPH 259


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