BLASTX nr result

ID: Coptis23_contig00028011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028011
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...   149   2e-34
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S...   145   3e-33
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S...   145   4e-33
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S...   143   1e-32
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S...   141   6e-32

>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/148 (48%), Positives = 102/148 (68%), Gaps = 1/148 (0%)
 Frame = -1

Query: 448 QTLPIVPRGTRTQTVNACIVKSNLWNQVRIFRLKANMRAKSDLLYSDYLLRVGNAEEPCV 269
           Q LP+VPRGTR Q  +A + +S LW  +R  RL  NMRA+SD  ++DYLLR+GN  E  +
Sbjct: 211 QVLPVVPRGTRAQVTDATLQRSYLWESIRKIRLSRNMRAQSDPWFADYLLRIGNGTEETI 270

Query: 268 DNDMIRIPDDMVIPW-ENEESIDKLIDAVFPDLCYNAKDINYFVNRALLTPLNSHVNRLN 92
            ++ + +PDD++I + +NEES++KLI  VFP L  NA+   Y   RA+L+  N HV++LN
Sbjct: 271 GDEYVCLPDDILIAYTDNEESVNKLIQEVFPSLERNARSSTYMSTRAILSTTNEHVDQLN 330

Query: 91  DHVLKFLPGQEVVFYSFDSVEDDFRNLY 8
             ++   PG+E V+YSFDSV+DD RN Y
Sbjct: 331 ASMINKFPGEEKVYYSFDSVDDDSRNNY 358


>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
            gi|241946187|gb|EES19332.1| hypothetical protein
            SORBIDRAFT_09g016160 [Sorghum bicolor]
          Length = 1379

 Score =  145 bits (367), Expect = 3e-33
 Identities = 73/149 (48%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
 Frame = -1

Query: 448  QTLPIVPRGTRTQTVNACIVKSNLWNQVRIFRLKANMRAKSDLLYSDYLLRVGNAEEPCV 269
            Q LP+VPRGTR Q  +A + +S LW+ VR  RL  NMRA+SD  +SDYLLR+GN  E  +
Sbjct: 1064 QVLPVVPRGTRGQVTDATLQRSYLWDSVRKIRLTRNMRAQSDPWFSDYLLRIGNGNEETI 1123

Query: 268  DNDMIRIPDDMVIPWENEES--IDKLIDAVFPDLCYNAKDINYFVNRALLTPLNSHVNRL 95
             ND +++P+D VI + ++E   ++KLI  VFP L  NAK   Y  +RA+L+  N HV+RL
Sbjct: 1124 ANDYVQMPEDTVIGYTDDEDDCLNKLIQHVFPSLEDNAKSTAYMSSRAILSTKNEHVDRL 1183

Query: 94   NDHVLKFLPGQEVVFYSFDSVEDDFRNLY 8
            N+ ++   PG+E V++SFDSV+D+ RN Y
Sbjct: 1184 NEKMIDRFPGEERVYHSFDSVDDESRNNY 1212


>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
           gi|241944914|gb|EES18059.1| hypothetical protein
           SORBIDRAFT_09g017230 [Sorghum bicolor]
          Length = 512

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/149 (46%), Positives = 102/149 (68%), Gaps = 2/149 (1%)
 Frame = -1

Query: 448 QTLPIVPRGTRTQTVNACIVKSNLWNQVRIFRLKANMRAKSDLLYSDYLLRVGNAEEPCV 269
           Q LP+VPRGTR Q  +A + +S LW+ +R  RL  NMRA++D  +S YLLR+GN  E  +
Sbjct: 196 QVLPVVPRGTRAQVTDASLQRSYLWDNIRKIRLTRNMRAQTDPWFSSYLLRIGNGTEETI 255

Query: 268 DNDMIRIPDDMVIPW--ENEESIDKLIDAVFPDLCYNAKDINYFVNRALLTPLNSHVNRL 95
           +N+ +R+P+D+VI +  +NE+SI+ LI  VFP L  NA+   Y   RA+L+  N H+++L
Sbjct: 256 ENNYVRLPEDIVIGYTDDNEDSINTLIQHVFPSLEENARSAEYMSTRAILSTKNEHLDQL 315

Query: 94  NDHVLKFLPGQEVVFYSFDSVEDDFRNLY 8
           N  ++   PG+E V++SFDS +DD RN Y
Sbjct: 316 NTKMITMFPGEEKVYHSFDSADDDSRNNY 344


>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
            gi|241937646|gb|EES10791.1| hypothetical protein
            SORBIDRAFT_06g016400 [Sorghum bicolor]
          Length = 998

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/149 (46%), Positives = 101/149 (67%), Gaps = 2/149 (1%)
 Frame = -1

Query: 448  QTLPIVPRGTRTQTVNACIVKSNLWNQVRIFRLKANMRAKSDLLYSDYLLRVGNAEEPCV 269
            Q LP+VPRGTR Q  +A + +S LW+ +R   L  NMRA++D  +S YLLR+ N  E  +
Sbjct: 682  QVLPVVPRGTRAQVTDASLQRSYLWDNIRKIILTRNMRAQTDPWFSSYLLRIRNGTEETI 741

Query: 268  DNDMIRIPDDMVIPW--ENEESIDKLIDAVFPDLCYNAKDINYFVNRALLTPLNSHVNRL 95
            +ND +R+P+D+VI +  +NE+SI+ LI  VFP L  NA+   Y   RA+L+  N HV++L
Sbjct: 742  ENDYVRLPEDIVIGYTDDNEDSINTLIQHVFPSLEENARSAEYMSTRAILSTKNEHVDQL 801

Query: 94   NDHVLKFLPGQEVVFYSFDSVEDDFRNLY 8
            N  ++   PG+E V++SFDSV+DD RN Y
Sbjct: 802  NTKMIAMFPGEEKVYHSFDSVDDDSRNNY 830


>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
            gi|241946122|gb|EES19267.1| hypothetical protein
            SORBIDRAFT_09g008040 [Sorghum bicolor]
          Length = 1679

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/146 (46%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
 Frame = -1

Query: 448  QTLPIVPRGTRTQTVNACIVKSNLWNQVRIFRLKANMRAKSDLLYSDYLLRVGNAEEPCV 269
            Q LP+VPRGTR Q  +A + KS LW+Q+R  RL  NMRA+SD  +S+YLLR+GN  E  +
Sbjct: 1364 QVLPVVPRGTRAQVTDATLQKSYLWDQIRKIRLTQNMRAQSDPWFSEYLLRIGNGTEETI 1423

Query: 268  DNDMIRIPDDMVIPW-ENEESIDKLIDAVFPDLCYNAKDINYFVNRALLTPLNSHVNRLN 92
             +D +R+PDD+VI + + +E++++LI +VFP L  +A    Y   RA+L+  N HV+RLN
Sbjct: 1424 GDDYVRLPDDIVIGYTDTDEAVNRLISSVFPSLEEHATSAAYMSGRAILSTKNEHVDRLN 1483

Query: 91   DHVLKFLPGQEVVFYSFDSVEDDFRN 14
              +++  PG+E V++SFD++ DD +N
Sbjct: 1484 ALMIERFPGEEKVYHSFDTIVDDPQN 1509


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