BLASTX nr result

ID: Coptis23_contig00028008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028008
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondri...   138   1e-64
ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-64
gb|ABF95833.1| Fumarate hydratase 1, mitochondrial precursor, pu...   135   2e-63
ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondri...   136   2e-63
gb|EEE59021.1| hypothetical protein OsJ_10766 [Oryza sativa Japo...   135   2e-63

>ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondrial-like [Cucumis
           sativus] gi|449484240|ref|XP_004156827.1| PREDICTED:
           fumarate hydratase 1, mitochondrial-like [Cucumis
           sativus]
          Length = 495

 Score =  138 bits (348), Expect(2) = 1e-64
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   GQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIADAVAEETNLP 180
           GQEFSGY+TQV+YGIDRV+CTLPRMYQLAQGGTAVGTGLNTKKGFDVKIA AVAEETNLP
Sbjct: 228 GQEFSGYTTQVKYGIDRVLCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETNLP 287

Query: 181 FVTAENKFEAL 213
           FVTAENKFEAL
Sbjct: 288 FVTAENKFEAL 298



 Score =  133 bits (335), Expect(2) = 1e-64
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = +3

Query: 324 SASLMKIGNDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDH 503
           +ASLMKI NDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+H
Sbjct: 315 AASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNH 374

Query: 504 VAITVGG 524
           VAITVGG
Sbjct: 375 VAITVGG 381


>ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|222844460|gb|EEE82007.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  138 bits (348), Expect(2) = 3e-64
 Identities = 67/71 (94%), Positives = 69/71 (97%)
 Frame = +1

Query: 1   GQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIADAVAEETNLP 180
           GQEFSGY+TQV+YGIDRVMCTLP MYQLAQGGTAVGTGLNTKKGFDVKIA AVAEETNLP
Sbjct: 224 GQEFSGYTTQVKYGIDRVMCTLPHMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETNLP 283

Query: 181 FVTAENKFEAL 213
           FVTAENKFEAL
Sbjct: 284 FVTAENKFEAL 294



 Score =  132 bits (331), Expect(2) = 3e-64
 Identities = 63/67 (94%), Positives = 65/67 (97%)
 Frame = +3

Query: 324 SASLMKIGNDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDH 503
           + SLMKI NDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+H
Sbjct: 311 ATSLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNH 370

Query: 504 VAITVGG 524
           VAITVGG
Sbjct: 371 VAITVGG 377


>gb|ABF95833.1| Fumarate hydratase 1, mitochondrial precursor, putative, expressed
           [Oryza sativa Japonica Group]
           gi|215769409|dbj|BAH01638.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 502

 Score =  135 bits (340), Expect(2) = 2e-63
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = +1

Query: 1   GQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIADAVAEETNLP 180
           GQEFSGY+TQV+YGIDR++CTLPRMYQLAQGGTAVGTGLNTKKGFDVKIA AVAEET LP
Sbjct: 236 GQEFSGYATQVKYGIDRIVCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETELP 295

Query: 181 FVTAENKFEAL 213
           FVTAENKFEAL
Sbjct: 296 FVTAENKFEAL 306



 Score =  132 bits (333), Expect(2) = 2e-63
 Identities = 63/67 (94%), Positives = 65/67 (97%)
 Frame = +3

Query: 324 SASLMKIGNDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDH 503
           SASLMKI NDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+H
Sbjct: 323 SASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNH 382

Query: 504 VAITVGG 524
           V +TVGG
Sbjct: 383 VGVTVGG 389


>ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondrial [Vitis vinifera]
           gi|297743928|emb|CBI36898.3| unnamed protein product
           [Vitis vinifera]
          Length = 494

 Score =  136 bits (342), Expect(2) = 2e-63
 Identities = 67/71 (94%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   GQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIADAVAEETNLP 180
           GQEFSGY TQV+YGIDRV CTLPRMYQLAQGGTAVGTGLNTKKGFDVKIA AVAEETNLP
Sbjct: 228 GQEFSGYYTQVKYGIDRVTCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIARAVAEETNLP 287

Query: 181 FVTAENKFEAL 213
           FVTAENKFEAL
Sbjct: 288 FVTAENKFEAL 298



 Score =  132 bits (331), Expect(2) = 2e-63
 Identities = 63/67 (94%), Positives = 65/67 (97%)
 Frame = +3

Query: 324 SASLMKIGNDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDH 503
           + SLMKI NDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+H
Sbjct: 315 ATSLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNH 374

Query: 504 VAITVGG 524
           VAITVGG
Sbjct: 375 VAITVGG 381


>gb|EEE59021.1| hypothetical protein OsJ_10766 [Oryza sativa Japonica Group]
          Length = 480

 Score =  135 bits (340), Expect(2) = 2e-63
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = +1

Query: 1   GQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIADAVAEETNLP 180
           GQEFSGY+TQV+YGIDR++CTLPRMYQLAQGGTAVGTGLNTKKGFDVKIA AVAEET LP
Sbjct: 214 GQEFSGYATQVKYGIDRIVCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETELP 273

Query: 181 FVTAENKFEAL 213
           FVTAENKFEAL
Sbjct: 274 FVTAENKFEAL 284



 Score =  132 bits (333), Expect(2) = 2e-63
 Identities = 63/67 (94%), Positives = 65/67 (97%)
 Frame = +3

Query: 324 SASLMKIGNDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDH 503
           SASLMKI NDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+H
Sbjct: 301 SASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNH 360

Query: 504 VAITVGG 524
           V +TVGG
Sbjct: 361 VGVTVGG 367


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