BLASTX nr result

ID: Coptis23_contig00028004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028004
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]    72   1e-17
emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]    70   6e-17
emb|CAN76756.1| hypothetical protein VITISV_012606 [Vitis vinifera]    70   3e-16
ref|XP_003633300.1| PREDICTED: uncharacterized protein LOC100854...    67   6e-16
emb|CAN62106.1| hypothetical protein VITISV_033315 [Vitis vinifera]    69   8e-16

>emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
          Length = 781

 Score = 72.0 bits (175), Expect(2) = 1e-17
 Identities = 45/161 (27%), Positives = 72/161 (44%)
 Frame = +1

Query: 1   LGRRWIHEMRAVSSTYYQVI*FPTPAETYKVRGDQVASKNSHQNKIKMMSRGLEDEPTSS 180
           LGR W+H M+ + STYYQ++ F T      +   Q+A++  +Q        G   E  S 
Sbjct: 384 LGRTWLHYMKVIPSTYYQMVSFLTKDGQIDLYDSQLAARQCYQ---IAREAGTSQEDASL 440

Query: 181 KKRPA*QLQCGXXXXXXXXXXXPKTLDEIETVNLGEGEKEKFTSIGSSLTEEWKGKLVQC 360
            +                    P   D ++ + + E E    T+I S LT E    +   
Sbjct: 441 PE---------------SSHAYPPAADPLQAIQISE-EGTHLTNISSLLTPEETRNMQNA 484

Query: 361 LVKNRDVFTWGIEDVTGLDPEFACHRLHMREDAKPVRQKMR 483
           L +N DVF W   D+ G+ P    HRL++   A+P++Q++R
Sbjct: 485 LRQNHDVFAWAHSDMKGIHPSITSHRLNVLPTARPIQQRVR 525



 Score = 43.1 bits (100), Expect(2) = 1e-17
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +2

Query: 518 LKSAGIIREVEFTDWLSNIVAVPKKNGKVR 607
           L  AG I+EV++ DWL+N+V VPKK GK R
Sbjct: 542 LLEAGFIKEVDYPDWLTNVVVVPKKEGKWR 571


>emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]
          Length = 1387

 Score = 69.7 bits (169), Expect(2) = 6e-17
 Identities = 47/161 (29%), Positives = 74/161 (45%)
 Frame = +1

Query: 1   LGRRWIHEMRAVSSTYYQVI*FPTPAETYKVRGDQVASKNSHQNKIKMMSRGLEDEPTSS 180
           LGR W+H M+A+ STY+Q++ F T      + G Q+A++  +Q     ++R     PT  
Sbjct: 448 LGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQLAARQCYQ-----IAREQLLSPTDK 502

Query: 181 KKRPA*QLQCGXXXXXXXXXXXPKTLDEIETVNLGEGEKEKFTSIGSSLTEEWKGKLVQC 360
                                 P T D + T+ + E E    T I S LT E    +   
Sbjct: 503 ---------------------DPLTADPLRTIQISE-EDTHLTYISSLLTLEETRNIQDA 540

Query: 361 LVKNRDVFTWGIEDVTGLDPEFACHRLHMREDAKPVRQKMR 483
           L ++ DVF W   D+ G+ P    H+L++   A+ VRQ++R
Sbjct: 541 LRQSHDVFAWAHSDMKGIHPSIISHKLNVLPTARLVRQRIR 581



 Score = 43.1 bits (100), Expect(2) = 6e-17
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 530 GIIREVEFTDWLSNIVAVPKKNGKVR 607
           G IREVE+ DWL+N+V VPKK GK R
Sbjct: 602 GFIREVEYPDWLANVVVVPKKEGKWR 627


>emb|CAN76756.1| hypothetical protein VITISV_012606 [Vitis vinifera]
          Length = 1195

 Score = 69.7 bits (169), Expect(2) = 3e-16
 Identities = 36/90 (40%), Positives = 52/90 (57%)
 Frame = +1

Query: 256 LDEIETVNLGEGEKEKFTSIGSSLTEEWKGKLVQCLVKNRDVFTWGIEDVTGLDPEFACH 435
           + ++ETV+ G G++ +   IGS L+ E + +L+  L    DVF W  ED+ GLDP    H
Sbjct: 149 IGDVETVDFGTGDQPRELKIGSPLSTEERDRLIHLLRSYLDVFAWSYEDMPGLDPSIVQH 208

Query: 436 RLHMREDAKPVRQKMR*GRKNPRRGCQAKE 525
            L     A+PV+QK+R  R +PR   Q KE
Sbjct: 209 HLPTLPHARPVKQKLR--RLHPRWSLQVKE 236



 Score = 40.8 bits (94), Expect(2) = 3e-16
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +2

Query: 524 SAGIIREVEFTDWLSNIVAVPKKNGKVR 607
           S G I  VE+ +WL+N+V VPKK+GKVR
Sbjct: 243 SVGFISVVEYPEWLANVVPVPKKDGKVR 270


>ref|XP_003633300.1| PREDICTED: uncharacterized protein LOC100854777 [Vitis vinifera]
          Length = 2323

 Score = 67.4 bits (163), Expect(2) = 6e-16
 Identities = 36/88 (40%), Positives = 50/88 (56%)
 Frame = +1

Query: 262  EIETVNLGEGEKEKFTSIGSSLTEEWKGKLVQCLVKNRDVFTWGIEDVTGLDPEFACHRL 441
            + E V+ G  ++ K   IGS L+ + +  L+Q L    DVF W  ED+ GLDP    HRL
Sbjct: 1212 DTEIVDFGTADQPKELRIGSDLSTDERDSLIQLLRSYLDVFAWSYEDMPGLDPSIVQHRL 1271

Query: 442  HMREDAKPVRQKMR*GRKNPRRGCQAKE 525
             +   A+PV+QK+R  R +PR   Q KE
Sbjct: 1272 PLLPHARPVKQKLR--RLHPRWSLQVKE 1297



 Score = 42.0 bits (97), Expect(2) = 6e-16
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +2

Query: 524  SAGIIREVEFTDWLSNIVAVPKKNGKVR 607
            S G +  VE+ +WL+N+V VPKKNGKVR
Sbjct: 1304 SVGFLSVVEYPEWLANVVPVPKKNGKVR 1331


>emb|CAN62106.1| hypothetical protein VITISV_033315 [Vitis vinifera]
          Length = 2351

 Score = 68.9 bits (167), Expect(2) = 8e-16
 Identities = 37/91 (40%), Positives = 52/91 (57%)
 Frame = +1

Query: 253  TLDEIETVNLGEGEKEKFTSIGSSLTEEWKGKLVQCLVKNRDVFTWGIEDVTGLDPEFAC 432
            T+ + E V+ G  ++ K   IGS L+ + +  L+Q L    DVF W  ED+ GLDP    
Sbjct: 951  TVGDTEIVDFGTADQPKELRIGSDLSTDERDSLIQLLRAYLDVFAWSYEDMPGLDPSIVQ 1010

Query: 433  HRLHMREDAKPVRQKMR*GRKNPRRGCQAKE 525
            HRL +   A+PV+QK+R  R +PR   Q KE
Sbjct: 1011 HRLPLLPHARPVKQKLR--RLHPRWSLQVKE 1039



 Score = 40.0 bits (92), Expect(2) = 8e-16
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +2

Query: 524  SAGIIREVEFTDWLSNIVAVPKKNGKVR 607
            S G +  VE+ +WL+N+V VPKK+GKVR
Sbjct: 1046 SVGFLSVVEYPEWLANVVPVPKKDGKVR 1073


Top