BLASTX nr result

ID: Coptis23_contig00028003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028003
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273746.1| PREDICTED: uncharacterized protein LOC100259...    89   3e-16
emb|CAN83784.1| hypothetical protein VITISV_008227 [Vitis vinifera]    89   3e-16
gb|AFK34304.1| unknown [Medicago truncatula]                           89   4e-16
ref|XP_003591899.1| hypothetical protein MTR_1g095000 [Medicago ...    89   4e-16
gb|ACJ85242.1| unknown [Medicago truncatula]                           89   4e-16

>ref|XP_002273746.1| PREDICTED: uncharacterized protein LOC100259928 [Vitis vinifera]
           gi|296086014|emb|CBI31455.3| unnamed protein product
           [Vitis vinifera]
          Length = 270

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/78 (61%), Positives = 53/78 (67%), Gaps = 7/78 (8%)
 Frame = -1

Query: 213 LRIDRLVGMLSGFSLPNGCMRTCLXXXXXXXXXXXVF-GSD------LDGNFGWSKGYVA 55
           LRIDRL+ M +GFSLPNGC RTCL            F GS+       DG F ++KGYVA
Sbjct: 94  LRIDRLLAMFAGFSLPNGCRRTCLVAVIGGSADDTFFLGSEDFKIGGFDGKFSFNKGYVA 153

Query: 54  GILTVDTVADFLPRKGPL 1
           GILTVDTVADFLPRKGPL
Sbjct: 154 GILTVDTVADFLPRKGPL 171


>emb|CAN83784.1| hypothetical protein VITISV_008227 [Vitis vinifera]
          Length = 222

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/78 (61%), Positives = 53/78 (67%), Gaps = 7/78 (8%)
 Frame = -1

Query: 213 LRIDRLVGMLSGFSLPNGCMRTCLXXXXXXXXXXXVF-GSD------LDGNFGWSKGYVA 55
           LRIDRL+ M +GFSLPNGC RTCL            F GS+       DG F ++KGYVA
Sbjct: 46  LRIDRLLAMFAGFSLPNGCRRTCLVAVIGGSADDTFFLGSEDFKIGGFDGKFSFNKGYVA 105

Query: 54  GILTVDTVADFLPRKGPL 1
           GILTVDTVADFLPRKGPL
Sbjct: 106 GILTVDTVADFLPRKGPL 123


>gb|AFK34304.1| unknown [Medicago truncatula]
          Length = 280

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/78 (62%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
 Frame = -1

Query: 213 LRIDRLVGMLSGFSLPNGCMRTCLXXXXXXXXXXXV-FGSD------LDGNFGWSKGYVA 55
           LR+DRLV ML+GFSLPNGC RTCL             FGSD       DG    +KGYVA
Sbjct: 104 LRMDRLVAMLAGFSLPNGCKRTCLVAVIGSSLDQTFLFGSDDFKIAGFDGKLSLNKGYVA 163

Query: 54  GILTVDTVADFLPRKGPL 1
           GILTVDTVADFLPRKGPL
Sbjct: 164 GILTVDTVADFLPRKGPL 181


>ref|XP_003591899.1| hypothetical protein MTR_1g095000 [Medicago truncatula]
           gi|355480947|gb|AES62150.1| hypothetical protein
           MTR_1g095000 [Medicago truncatula]
          Length = 280

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/78 (62%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
 Frame = -1

Query: 213 LRIDRLVGMLSGFSLPNGCMRTCLXXXXXXXXXXXV-FGSD------LDGNFGWSKGYVA 55
           LR+DRLV ML+GFSLPNGC RTCL             FGSD       DG    +KGYVA
Sbjct: 104 LRMDRLVAMLAGFSLPNGCKRTCLVAVIGSSLDQTFLFGSDDFKIAGFDGKLSLNKGYVA 163

Query: 54  GILTVDTVADFLPRKGPL 1
           GILTVDTVADFLPRKGPL
Sbjct: 164 GILTVDTVADFLPRKGPL 181


>gb|ACJ85242.1| unknown [Medicago truncatula]
          Length = 280

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/78 (62%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
 Frame = -1

Query: 213 LRIDRLVGMLSGFSLPNGCMRTCLXXXXXXXXXXXV-FGSD------LDGNFGWSKGYVA 55
           LR+DRLV ML+GFSLPNGC RTCL             FGSD       DG    +KGYVA
Sbjct: 104 LRMDRLVAMLAGFSLPNGCKRTCLVAVIGSSLDQTFLFGSDDFKIAGFDGKLSLNKGYVA 163

Query: 54  GILTVDTVADFLPRKGPL 1
           GILTVDTVADFLPRKGPL
Sbjct: 164 GILTVDTVADFLPRKGPL 181


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