BLASTX nr result
ID: Coptis23_contig00028001
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028001 (597 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246... 66 5e-09 emb|CBI35891.3| unnamed protein product [Vitis vinifera] 66 5e-09 emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera] 66 5e-09 ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2... 63 4e-08 >ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246362 [Vitis vinifera] Length = 403 Score = 65.9 bits (159), Expect = 5e-09 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 3/46 (6%) Frame = +2 Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSID---EGEEELVL 448 M +W KSLRED++R+ +NPSFSSTLLD+IYRSID EGEEELVL Sbjct: 1 MQRWDKSLREDRYRNGRENPSFSSTLLDAIYRSIDEGGEGEEELVL 46 >emb|CBI35891.3| unnamed protein product [Vitis vinifera] Length = 400 Score = 65.9 bits (159), Expect = 5e-09 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 3/46 (6%) Frame = +2 Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSID---EGEEELVL 448 M +W KSLRED++R+ +NPSFSSTLLD+IYRSID EGEEELVL Sbjct: 102 MQRWDKSLREDRYRNGRENPSFSSTLLDAIYRSIDEGGEGEEELVL 147 >emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera] Length = 403 Score = 65.9 bits (159), Expect = 5e-09 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 3/46 (6%) Frame = +2 Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSID---EGEEELVL 448 M +W KSLRED++R+ +NPSFSSTLLD+IYRSID EGEEELVL Sbjct: 1 MQRWDKSLREDRYRNGRENPSFSSTLLDAIYRSIDEGGEGEEELVL 46 >ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1| predicted protein [Populus trichocarpa] Length = 453 Score = 63.9 bits (154), Expect = 2e-08 Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 5/48 (10%) Frame = +2 Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSIDE-----GEEELVL 448 MD+W K LR+D++RH+ +NPSFSSTLLD+IYRSIDE GEEE ++ Sbjct: 1 MDRWEKPLRDDRYRHQRENPSFSSTLLDAIYRSIDENGSGKGEEEQLI 48 >ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1| predicted protein [Populus trichocarpa] Length = 380 Score = 62.8 bits (151), Expect = 4e-08 Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 5/48 (10%) Frame = +2 Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSIDE-----GEEELVL 448 MD+W K LR+D++RH+ +NPSFSSTLLD IYRSIDE GEEE ++ Sbjct: 1 MDRWEKPLRDDRYRHQRQNPSFSSTLLDVIYRSIDESGNGKGEEEQLI 48