BLASTX nr result

ID: Coptis23_contig00028001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028001
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246...    66   5e-09
emb|CBI35891.3| unnamed protein product [Vitis vinifera]               66   5e-09
emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]    66   5e-09
ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08

>ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246362 [Vitis vinifera]
          Length = 403

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 3/46 (6%)
 Frame = +2

Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSID---EGEEELVL 448
           M +W KSLRED++R+  +NPSFSSTLLD+IYRSID   EGEEELVL
Sbjct: 1   MQRWDKSLREDRYRNGRENPSFSSTLLDAIYRSIDEGGEGEEELVL 46


>emb|CBI35891.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 3/46 (6%)
 Frame = +2

Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSID---EGEEELVL 448
           M +W KSLRED++R+  +NPSFSSTLLD+IYRSID   EGEEELVL
Sbjct: 102 MQRWDKSLREDRYRNGRENPSFSSTLLDAIYRSIDEGGEGEEELVL 147


>emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]
          Length = 403

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 3/46 (6%)
 Frame = +2

Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSID---EGEEELVL 448
           M +W KSLRED++R+  +NPSFSSTLLD+IYRSID   EGEEELVL
Sbjct: 1   MQRWDKSLREDRYRNGRENPSFSSTLLDAIYRSIDEGGEGEEELVL 46


>ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 5/48 (10%)
 Frame = +2

Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSIDE-----GEEELVL 448
           MD+W K LR+D++RH+ +NPSFSSTLLD+IYRSIDE     GEEE ++
Sbjct: 1   MDRWEKPLRDDRYRHQRENPSFSSTLLDAIYRSIDENGSGKGEEEQLI 48


>ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 5/48 (10%)
 Frame = +2

Query: 320 MDQWTKSLREDKFRHRSKNPSFSSTLLDSIYRSIDE-----GEEELVL 448
           MD+W K LR+D++RH+ +NPSFSSTLLD IYRSIDE     GEEE ++
Sbjct: 1   MDRWEKPLRDDRYRHQRQNPSFSSTLLDVIYRSIDESGNGKGEEEQLI 48


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