BLASTX nr result

ID: Coptis23_contig00027997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027997
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271044.2| PREDICTED: uncharacterized protein LOC100247...   144   5e-33
ref|XP_002277228.1| PREDICTED: uncharacterized protein LOC100259...   140   3e-31
ref|XP_002312721.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002524784.1| hydrolase, putative [Ricinus communis] gi|22...   127   2e-27
ref|XP_004158629.1| PREDICTED: uncharacterized LOC101212223, par...   118   8e-25

>ref|XP_002271044.2| PREDICTED: uncharacterized protein LOC100247717 [Vitis vinifera]
          Length = 511

 Score =  144 bits (362), Expect(2) = 5e-33
 Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
 Frame = +1

Query: 187 FPAMLSLLGRQLRRFCSRIRWSLK-RSKPKVVIKRFGKSNSKTQ---PREELDNQGSVVH 354
           F AML ++  +LRR CSR+RW L+ RS+P+VVIK  GKS+SK+     RE   N  +VVH
Sbjct: 15  FSAMLKIINTRLRRLCSRLRWPLRGRSRPRVVIKTLGKSSSKSHFDAKREAAANGSAVVH 74

Query: 355 LNGQLGVSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRAK 534
            NGQLG  K  + IR+ATFNAA+FSMAPAVP A+K     +   E  K +R+++++ R K
Sbjct: 75  PNGQLGAEKPNKTIRIATFNAALFSMAPAVPRAEKGENFGNGNVEGLKEKRSVDMNFRTK 134

Query: 535 SVNDRPKSILKQSPLHPISM 594
           S N+RPKSILKQSPLHP SM
Sbjct: 135 SANERPKSILKQSPLHPNSM 154



 Score = 23.1 bits (48), Expect(2) = 5e-33
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 596 KQLSFVEDERGSSSKS 643
           ++LSFVE++ GSSS +
Sbjct: 188 RKLSFVEEKEGSSSST 203


>ref|XP_002277228.1| PREDICTED: uncharacterized protein LOC100259606 [Vitis vinifera]
          Length = 486

 Score =  140 bits (352), Expect = 3e-31
 Identities = 74/130 (56%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
 Frame = +1

Query: 196 MLSLLGRQLRRFCSRIRWSL-KRSKPKVVIKRFGKSNSKTQPREELDNQGSVVHLNGQLG 372
           MLS+L R+L+R C+R+RW + +R KPKVVI+RFGK   K QP+    +  S +HLN QLG
Sbjct: 1   MLSILHRKLQRICARLRWLMWRRPKPKVVIRRFGKL-MKRQPKGVPGSSKSAIHLNSQLG 59

Query: 373 VSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRAKSVNDRP 552
            S   +PIR+ATFNAAMF +APAVP  +KSV+   EEE+Y + + +M++D  AKS N RP
Sbjct: 60  RSISGKPIRIATFNAAMFCLAPAVPKPEKSVVFCQEEEDYLRFKSHMKIDTWAKSENYRP 119

Query: 553 KSILKQSPLH 582
           KSILKQSPLH
Sbjct: 120 KSILKQSPLH 129


>ref|XP_002312721.1| predicted protein [Populus trichocarpa] gi|222852541|gb|EEE90088.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  127 bits (318), Expect(2) = 1e-27
 Identities = 66/130 (50%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
 Frame = +1

Query: 196 MLSLLGRQLRRFCSRIRWSL-KRSKPKVVIKRFGKSNSKTQPREELDNQGSVVHLNGQLG 372
           ML L+GR+LR+ C+RIR  + +R +PKV+IKRFGK +SK + +     + S +HLNG+ G
Sbjct: 1   MLGLIGRKLRQLCARIRLLIWRRPRPKVIIKRFGKISSKDRCKWRPGFRKSSIHLNGKHG 60

Query: 373 VSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRAKSVNDRP 552
            S  +RPIR+ATFN AMFS+APAVP A++S++   E + Y   +  +E D    SV+  P
Sbjct: 61  NSSSDRPIRIATFNVAMFSLAPAVPKAEESIMISQEHDGYMAYKSPVEFDAHVNSVSYYP 120

Query: 553 KSILKQSPLH 582
           KSILKQSPLH
Sbjct: 121 KSILKQSPLH 130



 Score = 22.3 bits (46), Expect(2) = 1e-27
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 596 KQLSFVEDERGSSS 637
           K L FV+DE+G SS
Sbjct: 167 KLLGFVDDEKGGSS 180


>ref|XP_002524784.1| hydrolase, putative [Ricinus communis] gi|223535968|gb|EEF37627.1|
           hydrolase, putative [Ricinus communis]
          Length = 523

 Score =  127 bits (318), Expect = 2e-27
 Identities = 70/140 (50%), Positives = 93/140 (66%), Gaps = 5/140 (3%)
 Frame = +1

Query: 187 FPAMLSLLGRQLRRFCSRIRWSL-KRSKPKVVIKRFGKSNSK--TQPREELDNQGSV-VH 354
           F  ML +L R+LRR CSR+RW + +RS+PK++I++ GKSNS      R E    GS  VH
Sbjct: 20  FSTMLKILNRRLRRLCSRLRWPIHRRSRPKILIRKLGKSNSNHHNDSRNESSMNGSATVH 79

Query: 355 LNGQLGVSKIE-RPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRA 531
            NG     K E +PI++ATFNAA+FSMAP VP    S   D + E++ K + ++  ++R 
Sbjct: 80  PNGLFDCLKTEEKPIKIATFNAALFSMAPVVPKVFNSSSIDYDIEDFEKGKTSLNFNLRT 139

Query: 532 KSVNDRPKSILKQSPLHPIS 591
           +S NDRPKSILKQSPLHP S
Sbjct: 140 RSANDRPKSILKQSPLHPSS 159


>ref|XP_004158629.1| PREDICTED: uncharacterized LOC101212223, partial [Cucumis sativus]
          Length = 491

 Score =  118 bits (296), Expect = 8e-25
 Identities = 70/147 (47%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
 Frame = +1

Query: 184 QFPAMLSLLGRQLRRFCSRIRWSLKRS-KPKV-VIKRFGKSNSKT--QPREELDN----- 336
           Q   ML  L R+LRR CSR+RW  +R+ +P+V +IK+FGK+ S+T   P + +D+     
Sbjct: 8   QLSTMLKFLNRKLRRLCSRLRWPRRRTIRPRVLIIKKFGKTTSQTTSHPDKTIDSFVNIA 67

Query: 337 -QGSVVHLNGQLGVSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNM 513
              S VH N Q  +   +RPIR+ATFNAA FSMAPAVP         ++     K RR++
Sbjct: 68  SSPSAVHPNSQFHLLTTQRPIRIATFNAASFSMAPAVP---------EKSNSSAKFRRSL 118

Query: 514 ELDIRAKSVNDRPKSILKQSPLHPISM 594
           + + R KSVNDRPKSILKQSPLH  S+
Sbjct: 119 DSNSRTKSVNDRPKSILKQSPLHTNSI 145


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