BLASTX nr result

ID: Coptis23_contig00027996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027996
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycin...    61   8e-08
gb|AFK42863.1| unknown [Lotus japonicus]                               60   2e-07
ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis ...    57   2e-06
emb|CBI26898.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002526027.1| Prolactin regulatory element-binding protein...    57   2e-06

>ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycine max]
          Length = 400

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -1

Query: 272 AHLGLVTVLMFSDDSRHVASASLDSSARVTLIQRKKKQNGLSIW 141
           AHLG+VT L FS DSR VAS S+DSSARVT+I+ +KK NGLS+W
Sbjct: 337 AHLGIVTALAFSPDSRAVASVSMDSSARVTIIE-EKKTNGLSLW 379


>gb|AFK42863.1| unknown [Lotus japonicus]
          Length = 209

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -1

Query: 272 AHLGLVTVLMFSDDSRHVASASLDSSARVTLIQRKKKQNGLSIW 141
           AHLG+VT L FS DSR +AS S+DSSARVT+I+ KK   G+S+W
Sbjct: 144 AHLGIVTALAFSPDSRALASVSMDSSARVTIIEGKKTSGGVSLW 187


>ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis vinifera]
          Length = 394

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -1

Query: 272 AHLGLVTVLMFSDDSRHVASASLDSSARVTLIQRKKKQNGLSIW 141
           AHLG+VT + FS DSR + SAS+DSSARVT+I+  KK NG S+W
Sbjct: 330 AHLGIVTTMRFSQDSRALVSASMDSSARVTVIKEMKK-NGFSLW 372


>emb|CBI26898.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -1

Query: 272 AHLGLVTVLMFSDDSRHVASASLDSSARVTLIQRKKKQNGLSIW 141
           AHLG+VT + FS DSR + SAS+DSSARVT+I+  KK NG S+W
Sbjct: 238 AHLGIVTTMRFSQDSRALVSASMDSSARVTVIKEMKK-NGFSLW 280


>ref|XP_002526027.1| Prolactin regulatory element-binding protein, putative [Ricinus
           communis] gi|223534674|gb|EEF36367.1| Prolactin
           regulatory element-binding protein, putative [Ricinus
           communis]
          Length = 390

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = -1

Query: 272 AHLGLVTVLMFSDDSRHVASASLDSSARVTLIQRKKKQNGLSIW 141
           AHLG+VT L FS DSR + SASLDSSARVTL+Q   K  GLS+W
Sbjct: 323 AHLGMVTALAFSHDSRALVSASLDSSARVTLVQ-DVKSGGLSLW 365


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