BLASTX nr result

ID: Coptis23_contig00027995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027995
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis...    69   4e-10
emb|CBI22299.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatu...    67   1e-09
ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glyci...    66   3e-09
ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glyci...    65   6e-09

>ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis vinifera]
          Length = 1967

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = -1

Query: 250 RSIDRSEVVVHASRIAHLLKDTDVSYLKLKDAACNIPHSFEHSSTLFKEVLKYNSEAFEY 71
           RS++R +V+  ASRIA LL++TD+SYL L+D  C+ P+ F     L+ EV++ N EAFEY
Sbjct: 61  RSLNRRDVISQASRIADLLRETDISYLNLRDDECSFPYGFVEPLVLYDEVVRCNPEAFEY 120

Query: 70  TVP 62
             P
Sbjct: 121 ITP 123


>emb|CBI22299.3| unnamed protein product [Vitis vinifera]
          Length = 1748

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = -1

Query: 250 RSIDRSEVVVHASRIAHLLKDTDVSYLKLKDAACNIPHSFEHSSTLFKEVLKYNSEAFEY 71
           RS++R +V+  ASRIA LL++TD+SYL L+D  C+ P+ F     L+ EV++ N EAFEY
Sbjct: 61  RSLNRRDVISQASRIADLLRETDISYLNLRDDECSFPYGFVEPLVLYDEVVRCNPEAFEY 120

Query: 70  TVP 62
             P
Sbjct: 121 ITP 123


>ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatula]
           gi|355493734|gb|AES74937.1| Sister chromatid cohesion
           [Medicago truncatula]
          Length = 1167

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/80 (42%), Positives = 53/80 (66%)
 Frame = -1

Query: 244 IDRSEVVVHASRIAHLLKDTDVSYLKLKDAACNIPHSFEHSSTLFKEVLKYNSEAFEYTV 65
           ++R E++  +S+IA +L++TDVSYL L+D A  +P+++     L  EVL+ N EAFE + 
Sbjct: 61  LNRVEILSQSSKIAEMLRNTDVSYLNLRDDAKTVPYNYAEPLELHDEVLRCNPEAFECSH 120

Query: 64  PGFIKERSSNSVVSEKKLYE 5
            G +KE+ S S + E KL E
Sbjct: 121 EGPVKEKISGSALPETKLSE 140


>ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1655

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = -1

Query: 244 IDRSEVVVHASRIAHLLKDTDVSYLKLKDAACNIPHSFEHSSTLFKEVLKYNSEAFEYTV 65
           ++R +V+  +++IA LL+ TDVSYL L+D A  +P+ +     L  EVL+ N EAFEY+ 
Sbjct: 59  LNRVDVLAQSAKIAELLRHTDVSYLNLRDEAKGVPYIYVEPLELHDEVLRCNPEAFEYST 118

Query: 64  PGFIKER-SSNSVVSEKKLYE 5
            G +KE+ S ++ V EK+  E
Sbjct: 119 AGHVKEQISGSAAVPEKRQSE 139


>ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1723

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = -1

Query: 244 IDRSEVVVHASRIAHLLKDTDVSYLKLKDAACNIPHSFEHSSTLFKEVLKYNSEAFEYTV 65
           ++R +V+  +++IA LL+ TDVSYL L+  A  +P+ +     L  EV++ N EAFEY+ 
Sbjct: 61  LNRVDVLAQSAKIAELLRHTDVSYLNLRGEAKGVPYIYVEPLELHDEVIRCNPEAFEYST 120

Query: 64  PGFIKERSSNSVVSEKK 14
            G +KE+   S VSEK+
Sbjct: 121 AGPVKEQIYGSAVSEKR 137


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