BLASTX nr result

ID: Coptis23_contig00027991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027991
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA61279.1| basic chitinase class 3 [Vigna unguiculata]           130   1e-28
emb|CAB65476.2| chitinase [Trifolium repens]                          125   4e-27
ref|XP_002264903.1| PREDICTED: acidic endochitinase-like [Vitis ...   124   6e-27
emb|CAC14016.1| chitinase [Vitis vinifera]                            124   6e-27
gb|AFK35577.1| unknown [Lotus japonicus]                              124   1e-26

>emb|CAA61279.1| basic chitinase class 3 [Vigna unguiculata]
          Length = 297

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/80 (76%), Positives = 71/80 (88%)
 Frame = -3

Query: 399 NVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPANVLKSQILPVIKSSRKYGGVM 220
           NVTNL+NSWKRWTST+PA K FLGLPA  AAAGSGF+PA+VL S+ILPVIK SRKYGGVM
Sbjct: 218 NVTNLLNSWKRWTSTVPAGKIFLGLPAPPAAAGSGFVPADVLTSKILPVIKKSRKYGGVM 277

Query: 219 LWSKYYDDLSGYSSSITGSV 160
           LWS+++D  +GYS+SI GSV
Sbjct: 278 LWSRFFDVQNGYSTSIIGSV 297


>emb|CAB65476.2| chitinase [Trifolium repens]
          Length = 298

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = -3

Query: 399 NVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPANVLKSQILPVIKSSRKYGGVM 220
           N+TNL+NSW  WT ++P +K FLGLPAA AAAGSGF PA+VL SQILPVIK SRKYGGVM
Sbjct: 219 NITNLVNSWNTWTRSVPTRKIFLGLPAATAAAGSGFTPADVLTSQILPVIKKSRKYGGVM 278

Query: 219 LWSKYYDDLSGYSSSITGSV 160
           LWS+++D  +GYS+SI GSV
Sbjct: 279 LWSRFFDGQTGYSTSIIGSV 298


>ref|XP_002264903.1| PREDICTED: acidic endochitinase-like [Vitis vinifera]
          Length = 297

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/80 (77%), Positives = 68/80 (85%)
 Frame = -3

Query: 399 NVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPANVLKSQILPVIKSSRKYGGVM 220
           N TNL+NSW RWTS+I ++  FLGLPAA AAAGSGFIP NVL SQILPVIK+S KYGGVM
Sbjct: 219 NTTNLLNSWNRWTSSINSR-IFLGLPAASAAAGSGFIPPNVLTSQILPVIKTSPKYGGVM 277

Query: 219 LWSKYYDDLSGYSSSITGSV 160
           LWSKYYDD SGYSS+I  SV
Sbjct: 278 LWSKYYDDQSGYSSTIKSSV 297


>emb|CAC14016.1| chitinase [Vitis vinifera]
          Length = 297

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/80 (77%), Positives = 68/80 (85%)
 Frame = -3

Query: 399 NVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPANVLKSQILPVIKSSRKYGGVM 220
           N TNL+NSW RWTS+I ++  FLGLPAA AAAGSGFIP NVL SQILPVIK+S KYGGVM
Sbjct: 219 NTTNLLNSWNRWTSSINSR-IFLGLPAASAAAGSGFIPPNVLTSQILPVIKTSPKYGGVM 277

Query: 219 LWSKYYDDLSGYSSSITGSV 160
           LWSKYYDD SGYSS+I  SV
Sbjct: 278 LWSKYYDDQSGYSSTIKSSV 297


>gb|AFK35577.1| unknown [Lotus japonicus]
          Length = 294

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/80 (72%), Positives = 67/80 (83%)
 Frame = -3

Query: 399 NVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPANVLKSQILPVIKSSRKYGGVM 220
           N+TNL+NSW RWTS++ A K FLGLPAA AAAGSG+IPA+VL SQILPVIK S KYGGVM
Sbjct: 215 NITNLVNSWNRWTSSVHAGKIFLGLPAAPAAAGSGYIPADVLSSQILPVIKKSTKYGGVM 274

Query: 219 LWSKYYDDLSGYSSSITGSV 160
           LWS++YD  +GYS SI  SV
Sbjct: 275 LWSRFYDGQNGYSDSIISSV 294


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