BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027983
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   101   1e-19
emb|CBI18968.3| unnamed protein product [Vitis vinifera]               98   2e-18
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...    95   1e-17
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...    79   1e-12
ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrata subsp. lyra...    76   9e-12

>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/81 (62%), Positives = 59/81 (72%)
 Frame = +2

Query: 38   SLTVNMQIISPGRSKFGQDHVDSRSAFGVSKHWKSRTDKQDDLYNPSGQVNQGPYDVFSE 217
            SLT+  Q+ S   S  GQDH DS S+F +SKHW +R +K+DD+ NP G V    YD FSE
Sbjct: 873  SLTIE-QLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDDICNPPGDVKASTYDGFSE 931

Query: 218  TQTESQVVSYEEDLSGRQMII 280
            TQTESQVV YEEDLSGRQMII
Sbjct: 932  TQTESQVVGYEEDLSGRQMII 952


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 47/74 (63%), Positives = 54/74 (72%)
 Frame = +2

Query: 59   IISPGRSKFGQDHVDSRSAFGVSKHWKSRTDKQDDLYNPSGQVNQGPYDVFSETQTESQV 238
            + S   S  GQDH DS S+F +SKHW +R +K+DD+ NP G V    YD FSETQTESQV
Sbjct: 869  LFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDDICNPPGDVKASTYDGFSETQTESQV 928

Query: 239  VSYEEDLSGRQMII 280
            V YEEDLSGRQMII
Sbjct: 929  VGYEEDLSGRQMII 942


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 49/81 (60%), Positives = 57/81 (70%)
 Frame = +2

Query: 38   SLTVNMQIISPGRSKFGQDHVDSRSAFGVSKHWKSRTDKQDDLYNPSGQVNQGPYDVFSE 217
            SLT+    + P     G+DH  S S  GV  HW +RT K+DDL NPS +VN+G YD F+E
Sbjct: 862  SLTIEQ--LYPSDPILGEDHGGSHSVIGVPNHWLNRTGKRDDLSNPSREVNRGVYDNFTE 919

Query: 218  TQTESQVVSYEEDLSGRQMII 280
            TQTESQVV YEEDLSGRQMII
Sbjct: 920  TQTESQVVLYEEDLSGRQMII 940


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = +2

Query: 74   RSKFGQDHVDSRSAFGVSKHWKSRTDKQDDLYNPSGQVNQGPYDVFSETQTESQVVSYEE 253
            RS   +D+ +  + FG+SKHW +R+ ++DD    S     G YD FSETQTESQVVSYEE
Sbjct: 892  RSVLSEDNSNPHTVFGLSKHWLNRSGRKDDNGEASQDRRAGIYDGFSETQTESQVVSYEE 951

Query: 254  DLSGRQMII 280
            DLSGRQM+I
Sbjct: 952  DLSGRQMLI 960


>ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333518|gb|EFH63936.1| MEI1 protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 970

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = +2

Query: 119  GVSKHWKSRTDKQDDLYNPSGQVNQGPYDVFSETQTESQVVSYEEDLSGRQMII 280
            G+S+HW +R  K DD+ +P G V  G Y  FSETQTESQVV YEEDLSGRQM+I
Sbjct: 907  GLSRHWINRVQKNDDMGSPPGDVTTGTYGNFSETQTESQVVGYEEDLSGRQMLI 960