BLASTX nr result

ID: Coptis23_contig00027975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027975
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276081.1| PREDICTED: uncharacterized protein LOC100264...   132   2e-29
ref|XP_004148439.1| PREDICTED: uncharacterized protein LOC101209...   131   7e-29
ref|XP_002307128.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002448617.1| hypothetical protein SORBIDRAFT_06g030240 [S...   129   3e-28
ref|NP_001140871.1| hypothetical protein [Zea mays] gi|194701534...   129   3e-28

>ref|XP_002276081.1| PREDICTED: uncharacterized protein LOC100264638 [Vitis vinifera]
           gi|296082500|emb|CBI21505.3| unnamed protein product
           [Vitis vinifera]
          Length = 323

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/91 (69%), Positives = 82/91 (90%)
 Frame = -3

Query: 274 IVFLRNIFTNSIVRLSVVSMAGLASEGLKYDKVIGQSANLFSLQRFINRSKPQIFKEQQQ 95
           +++   + T  + RL+VV+MAGLA+EGL+YDKV+GQSA+LF+LQRFINRSKPQ+ K+QQQ
Sbjct: 220 LIYSGQLDTKELDRLAVVAMAGLAAEGLQYDKVVGQSADLFTLQRFINRSKPQLSKDQQQ 279

Query: 94  NLTRWAVLFSGSLLKNNKSSHEALISAMSKK 2
           NLTRWAVLF+GSL+KNNK+ HEAL++AMSKK
Sbjct: 280 NLTRWAVLFAGSLIKNNKAIHEALMTAMSKK 310


>ref|XP_004148439.1| PREDICTED: uncharacterized protein LOC101209062 [Cucumis sativus]
           gi|449515690|ref|XP_004164881.1| PREDICTED:
           uncharacterized LOC101209062 [Cucumis sativus]
          Length = 320

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/91 (71%), Positives = 79/91 (86%)
 Frame = -3

Query: 274 IVFLRNIFTNSIVRLSVVSMAGLASEGLKYDKVIGQSANLFSLQRFINRSKPQIFKEQQQ 95
           +++   +    + RL+VV+MAGLASEGLKYDKV+GQSA+LF+LQRFINRSKP++ K+QQQ
Sbjct: 216 LIYSGQLDDKELDRLAVVAMAGLASEGLKYDKVVGQSADLFTLQRFINRSKPKLGKDQQQ 275

Query: 94  NLTRWAVLFSGSLLKNNKSSHEALISAMSKK 2
           NLTRWAVLFSGSLLKNNK  HEALI AMS+K
Sbjct: 276 NLTRWAVLFSGSLLKNNKLIHEALIKAMSEK 306


>ref|XP_002307128.1| predicted protein [Populus trichocarpa] gi|222856577|gb|EEE94124.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/91 (69%), Positives = 79/91 (86%)
 Frame = -3

Query: 274 IVFLRNIFTNSIVRLSVVSMAGLASEGLKYDKVIGQSANLFSLQRFINRSKPQIFKEQQQ 95
           +++   +    + RL+VV+MAGLA+EGL+YDKV+GQSA+LF+LQRFINRSKPQI K+QQQ
Sbjct: 217 LIYSGQLDAKELDRLAVVAMAGLAAEGLQYDKVVGQSADLFTLQRFINRSKPQISKDQQQ 276

Query: 94  NLTRWAVLFSGSLLKNNKSSHEALISAMSKK 2
           NLTRWAVLF GSL+KNNKS HEAL++AMS K
Sbjct: 277 NLTRWAVLFGGSLIKNNKSLHEALMTAMSNK 307


>ref|XP_002448617.1| hypothetical protein SORBIDRAFT_06g030240 [Sorghum bicolor]
           gi|241939800|gb|EES12945.1| hypothetical protein
           SORBIDRAFT_06g030240 [Sorghum bicolor]
          Length = 315

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/78 (79%), Positives = 76/78 (97%)
 Frame = -3

Query: 235 RLSVVSMAGLASEGLKYDKVIGQSANLFSLQRFINRSKPQIFKEQQQNLTRWAVLFSGSL 56
           RL+VVSMAGLA+EGL+YDKV+GQSA+LF+LQRFINR+KPQ+ K+QQQNLTRWAVLF+ SL
Sbjct: 224 RLAVVSMAGLAAEGLQYDKVVGQSADLFTLQRFINRTKPQLSKDQQQNLTRWAVLFAASL 283

Query: 55  LKNNKSSHEALISAMSKK 2
           LKNNK++HEAL+SAMS+K
Sbjct: 284 LKNNKAAHEALMSAMSQK 301


>ref|NP_001140871.1| hypothetical protein [Zea mays] gi|194701534|gb|ACF84851.1| unknown
           [Zea mays] gi|414585199|tpg|DAA35770.1| TPA:
           hypothetical protein ZEAMMB73_590939 [Zea mays]
          Length = 315

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/78 (79%), Positives = 76/78 (97%)
 Frame = -3

Query: 235 RLSVVSMAGLASEGLKYDKVIGQSANLFSLQRFINRSKPQIFKEQQQNLTRWAVLFSGSL 56
           RL+VVSMAGLA+EGL+YDKV+GQSA+LF+LQRFINR+KPQ+ K+QQQNLTRWAVLF+ SL
Sbjct: 224 RLAVVSMAGLAAEGLEYDKVVGQSADLFTLQRFINRTKPQLSKDQQQNLTRWAVLFAASL 283

Query: 55  LKNNKSSHEALISAMSKK 2
           LKNNK++HEAL+SAMS+K
Sbjct: 284 LKNNKAAHEALMSAMSQK 301


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