BLASTX nr result

ID: Coptis23_contig00027956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027956
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283410.2| PREDICTED: monogalactosyldiacylglycerol synt...   119   3e-25
emb|CAN84152.1| hypothetical protein VITISV_023773 [Vitis vinifera]   119   3e-25
sp|Q9SM44.1|MGDG_SPIOL RecName: Full=Monogalactosyldiacylglycero...   112   2e-23
ref|XP_002309689.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002324925.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002283410.2| PREDICTED: monogalactosyldiacylglycerol synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 528

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/89 (64%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = +3

Query: 12  SRIYKALSDFNSSIRLHCDRVPIGFSSIQLSSGDN-GLKGDSVGVLENEGLSVNSVEGGC 188
           SR+ +   +FN ++R HC+++PIGF+S+ ++SGDN GL+GD  GVLE+EGL +N VE   
Sbjct: 76  SRVRRIFGEFNRAVRFHCEKIPIGFASVHVNSGDNNGLRGDGNGVLEDEGLVLNVVEAEK 135

Query: 189 PKKVLILMSDTGGGHRASAEAIKMTFNEE 275
           PKKVLILMSDTGGGHRASAEAIK  FNEE
Sbjct: 136 PKKVLILMSDTGGGHRASAEAIKAAFNEE 164


>emb|CAN84152.1| hypothetical protein VITISV_023773 [Vitis vinifera]
          Length = 520

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/89 (64%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = +3

Query: 12  SRIYKALSDFNSSIRLHCDRVPIGFSSIQLSSGDN-GLKGDSVGVLENEGLSVNSVEGGC 188
           SR+ +   +FN ++R HC+++PIGF+S+ ++SGDN GL+GD  GVLE+EGL +N VE   
Sbjct: 68  SRVRRIFGEFNRAVRFHCEKIPIGFASVHVNSGDNNGLRGDGNGVLEDEGLVLNVVEAEK 127

Query: 189 PKKVLILMSDTGGGHRASAEAIKMTFNEE 275
           PKKVLILMSDTGGGHRASAEAIK  FNEE
Sbjct: 128 PKKVLILMSDTGGGHRASAEAIKAAFNEE 156


>sp|Q9SM44.1|MGDG_SPIOL RecName: Full=Monogalactosyldiacylglycerol synthase, chloroplastic;
           Short=SoMGD1; AltName: Full=MGDG synthase type A; Flags:
           Precursor gi|5912588|emb|CAB56218.1| MGDG synthase A
           [Spinacia oleracea]
          Length = 522

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = +3

Query: 12  SRIYKALSDFNSSIRLHCDRVPIGFSSIQLSSGD-NGLKGDSVGVLENEGLSVNSVEGGC 188
           S + + LSDFN  IRLHCDR+P+GFSSI L+SG+ NG+  +  GVLE+  + VN+VE   
Sbjct: 70  SNLKRILSDFNRVIRLHCDRIPLGFSSIGLNSGESNGVSDNGHGVLEDVRVPVNAVEPES 129

Query: 189 PKKVLILMSDTGGGHRASAEAIKMTFNEE 275
           PK+VLILMSDTGGGHRASAEAIK  FNEE
Sbjct: 130 PKRVLILMSDTGGGHRASAEAIKAAFNEE 158


>ref|XP_002309689.1| predicted protein [Populus trichocarpa] gi|222855665|gb|EEE93212.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 15/96 (15%)
 Frame = +3

Query: 33  SDFNSSIRLHCDRVPIGFSSIQLSSGDN---------------GLKGDSVGVLENEGLSV 167
           S+FN +IR HC+R+PIGF+S+Q+ SGDN               GL+ D  GVL ++G+ +
Sbjct: 78  SEFNRAIRFHCERIPIGFASVQVGSGDNNGNDNISSDNGNGINGLRDDGCGVLVDDGVPL 137

Query: 168 NSVEGGCPKKVLILMSDTGGGHRASAEAIKMTFNEE 275
           N VEG  PK+VLILMSDTGGGHRASAEAIK  FNEE
Sbjct: 138 NGVEGVSPKRVLILMSDTGGGHRASAEAIKAAFNEE 173


>ref|XP_002324925.1| predicted protein [Populus trichocarpa] gi|222866359|gb|EEF03490.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 15/96 (15%)
 Frame = +3

Query: 33  SDFNSSIRLHCDRVPIGFSSIQLSSGDN---------------GLKGDSVGVLENEGLSV 167
           S+FN +IRLH +R+PIGF+S+Q+ SGDN               GL+ D  G L ++G+ +
Sbjct: 78  SEFNRTIRLHSERIPIGFASVQIGSGDNNGNNNIGSNDGNNTNGLRDDGCGALLDDGVRL 137

Query: 168 NSVEGGCPKKVLILMSDTGGGHRASAEAIKMTFNEE 275
           N VEGG PK+VLILMSDTGGGHRASAEAIK  FNEE
Sbjct: 138 NGVEGGSPKRVLILMSDTGGGHRASAEAIKAAFNEE 173


Top