BLASTX nr result
ID: Coptis23_contig00027944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00027944
(1740 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus commun... 544 e-152
ref|XP_004148947.1| PREDICTED: D-amino acid dehydrogenase small ... 514 e-143
ref|XP_003622718.1| D-amino acid dehydrogenase small subunit [Me... 509 e-141
gb|AFK38871.1| unknown [Medicago truncatula] 504 e-140
ref|XP_004168063.1| PREDICTED: LOW QUALITY PROTEIN: D-amino acid... 502 e-139
>ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus communis]
gi|223533358|gb|EEF35109.1| fad oxidoreductase, putative
[Ricinus communis]
Length = 489
Score = 544 bits (1402), Expect = e-152
Identities = 283/487 (58%), Positives = 357/487 (73%), Gaps = 12/487 (2%)
Frame = -3
Query: 1672 SSIHKHDSIYSAPFSSHHLSKSLTCPQTFKLHKITTK-LSTRKNNYTL-----SPIVSAS 1511
S++H D + S P SS HL ++ TF K+ K +S ++Y P+++AS
Sbjct: 11 SNLHNRD-VVSLPSSSRHLCTNIKT--TFFGSKLPAKPISISLSHYNAPKLRREPLITAS 67
Query: 1510 LPSLALEFDVVIVGAGIIGLTIARQFLKESKLSVAVVDASVPCASGATGAGQGYIWMAGK 1331
+ FDVVIVGAGIIGL IARQFL S LSVAVVD +VPC SGATGAGQGYIWMA K
Sbjct: 68 THT----FDVVIVGAGIIGLAIARQFLIGSNLSVAVVDKAVPC-SGATGAGQGYIWMAHK 122
Query: 1330 TPGTELWELGMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELSMLKDRVE 1151
+P ++ WEL MRS +LW+ LA I +QG +PL+ LGWK TGSL++GR+ EE +LK RV+
Sbjct: 123 SPESDTWELTMRSHKLWKMLADSIHDQGLNPLEVLGWKMTGSLLVGRTPEESEVLKKRVQ 182
Query: 1150 LLSEAGLRAEFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKENRSYGS- 974
LSEAGLR E+LS +L +EP + G GGAAFL DDCQLDA RTV FI+K NR + +
Sbjct: 183 QLSEAGLRVEYLSSHDLHLQEPAIQVGESGGAAFLPDDCQLDAHRTVAFIEKANRYFATK 242
Query: 973 -RYVEFFNDPVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKNVVEKFDI 797
RY EF++DPVI +LRSS SGE+E V+T KN+LY KKA+V+AAG WSGSLM ++ ++DI
Sbjct: 243 GRYAEFYHDPVISLLRSSSSGEIEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLFREYDI 302
Query: 796 VLDVPVKPRKGHLLVIENFNSIRLNHGLMEVGYMDHQVAA----PSDSGVVDYSHTMSIS 629
V ++PVKPRKGHLLV+E+F S+ LNHG+ME GY+DHQ A + SG+ D+ +S+S
Sbjct: 303 VFNIPVKPRKGHLLVLESFGSLTLNHGVMEAGYVDHQGAGVNCTSAVSGLFDHKKNLSVS 362
Query: 628 MTATLDGAGNLVLGSSRQFVGFNTDLDESIVDRIWKRAGEFIPSLRDVGLEELSKSRKVR 449
MTAT+D GNLVLGSSR+F GF+T DESIV IW RAGEF P L++V L +L+ SRK+R
Sbjct: 363 MTATMDVMGNLVLGSSREFSGFSTQADESIVGHIWNRAGEFFPKLKEVYLGDLTASRKLR 422
Query: 448 VGLRPYMPDGKPIISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLFGNPSEINYVPF 269
+GLRPYMPDGKP+I +P P VL+A GHEG GL+LALGTAEMV +M+ GNP +NY PF
Sbjct: 423 IGLRPYMPDGKPVIGSIPDFPNVLIATGHEGGGLSLALGTAEMVADMVLGNPGTVNYAPF 482
Query: 268 SFHGRCC 248
S GRCC
Sbjct: 483 SVQGRCC 489
>ref|XP_004148947.1| PREDICTED: D-amino acid dehydrogenase small subunit-like [Cucumis
sativus]
Length = 490
Score = 514 bits (1324), Expect = e-143
Identities = 258/452 (57%), Positives = 335/452 (74%), Gaps = 9/452 (1%)
Frame = -3
Query: 1579 HKITTKLSTRKNNY------TLSPIVSASLPSL---ALEFDVVIVGAGIIGLTIARQFLK 1427
H IT S N Y L + S+S PS A EFDVVI+GAGIIGLTIARQFL
Sbjct: 45 HSITLSFSNG-NRYRPVSFCALKDVKSSSSPSRNGNASEFDVVIIGAGIIGLTIARQFLI 103
Query: 1426 ESKLSVAVVDASVPCASGATGAGQGYIWMAGKTPGTELWELGMRSKQLWENLAKGIEEQG 1247
S LSVAVVD VPC SGATGAGQGY+WMA K+PG+++WEL +RS++LWE LA+ + +QG
Sbjct: 104 GSDLSVAVVDKEVPC-SGATGAGQGYLWMAHKSPGSDIWELALRSQRLWEGLAESLRDQG 162
Query: 1246 FSPLQELGWKKTGSLMIGRSLEELSMLKDRVELLSEAGLRAEFLSRSELVKKEPLVDAGN 1067
+P +ELGWKKTGSL+IGR+ +EL MLK +V S AGL AE+LS +L+ EP + G+
Sbjct: 163 LNPSEELGWKKTGSLLIGRTPDELDMLKRKVNQFSGAGLEAEYLSSVDLLSMEPALLIGD 222
Query: 1066 EGGAAFLHDDCQLDALRTVEFIQKENRSYGSRYVEFFNDPVIDVLRSSGSGEVEGVRTEK 887
GAAFL +DCQLDA T FIQK NR + RY EFF+DPV +LRS +G++E V+T K
Sbjct: 223 SCGAAFLPNDCQLDAYSTAAFIQKANRHFKGRYAEFFHDPVTGLLRSGSNGKIEAVQTSK 282
Query: 886 NSLYCKKAVVIAAGSWSGSLMKNVVEKFDIVLDVPVKPRKGHLLVIENFNSIRLNHGLME 707
+LY KKA+V+AAG WSG+L+++++ + VLDVP+ PRKGHLLVIENFNS+ +NHGLME
Sbjct: 283 TTLYSKKAIVLAAGCWSGTLLRDLLREGKTVLDVPIMPRKGHLLVIENFNSLHVNHGLME 342
Query: 706 VGYMDHQVAAPSDSGVVDYSHTMSISMTATLDGAGNLVLGSSRQFVGFNTDLDESIVDRI 527
VGY++HQ + D+ T S+SMTAT+D GNL+LGSSR+F GFNT+++E IV RI
Sbjct: 343 VGYVNHQALTLAK----DFEQTSSVSMTATMDVQGNLILGSSREFAGFNTEINEFIVARI 398
Query: 526 WKRAGEFIPSLRDVGLEELSKSRKVRVGLRPYMPDGKPIISPVPGVPKVLVAAGHEGAGL 347
W+RA EF P+L++V L ++ S KVR+GLRPYM DGKP+I PVPG+ V +A+GHEG GL
Sbjct: 399 WERASEFFPTLKEVSLSDIKHSSKVRIGLRPYMLDGKPVIGPVPGLSNVFLASGHEGGGL 458
Query: 346 TLALGTAEMVFNMLFGNPSEINYVPFSFHGRC 251
++A+GTAEM+ NM+ G+P +++ PF GRC
Sbjct: 459 SMAMGTAEMIGNMVLGSPGKVDPAPFLVQGRC 490
>ref|XP_003622718.1| D-amino acid dehydrogenase small subunit [Medicago truncatula]
gi|355497733|gb|AES78936.1| D-amino acid dehydrogenase
small subunit [Medicago truncatula]
Length = 469
Score = 509 bits (1310), Expect = e-141
Identities = 256/468 (54%), Positives = 339/468 (72%), Gaps = 2/468 (0%)
Frame = -3
Query: 1663 HKHDSIYSAPFSSHHLSKSLTCPQTFKLHKITTKLSTRKNNYTLSPIVSASLPSLALEFD 1484
H H +S+ F SH S SLT ++ K ++ + S+S A FD
Sbjct: 6 HIHSINFSSVFPSHSSSSSLT------KRSLSYKYKFPATGNRMARLYSSS-DDRAKVFD 58
Query: 1483 VVIVGAGIIGLTIARQFLKESKLSVAVVDASVPCASGATGAGQGYIWMAGKTPGTELWEL 1304
VVIVGAGIIGLT+ARQFL +S LSVA+VD +PC SGATGAGQGY+WM KTPG+ W+L
Sbjct: 59 VVIVGAGIIGLTVARQFLMDSDLSVAIVDKGLPC-SGATGAGQGYLWMTHKTPGSATWDL 117
Query: 1303 GMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELSMLKDRVELLSEAGLRA 1124
MRS QLW +A+ ++EQG P+ ELGWKKTGSL++GR+ E MLK RV+ LSEAGL+A
Sbjct: 118 SMRSHQLWTMMAENLQEQGLDPIVELGWKKTGSLLVGRTRAESDMLKGRVKQLSEAGLKA 177
Query: 1123 EFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKENRSYGS--RYVEFFND 950
EFL S+L+K+EP + + AAFL DDCQLDA RTV +I+K NR++ S RY EF++D
Sbjct: 178 EFLGSSDLLKREPDLLVDKDTAAAFLPDDCQLDAHRTVAYIEKGNRNFASKGRYAEFYDD 237
Query: 949 PVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKNVVEKFDIVLDVPVKPR 770
PV +RS +G VE V+T KN+LY KKAV++AAG W+GSLM+++ + + VPV+PR
Sbjct: 238 PVKCFIRSDCNGGVEAVQTSKNTLYSKKAVIVAAGCWTGSLMQDLFRNWGMEFHVPVRPR 297
Query: 769 KGHLLVIENFNSIRLNHGLMEVGYMDHQVAAPSDSGVVDYSHTMSISMTATLDGAGNLVL 590
KGHLL ++NFNS++LNHGLME GY+DH + +S D+ +S+SMTAT+D AGNL++
Sbjct: 298 KGHLLALQNFNSLQLNHGLMEAGYVDHPSISDLESS--DHGRDLSVSMTATIDAAGNLLV 355
Query: 589 GSSRQFVGFNTDLDESIVDRIWKRAGEFIPSLRDVGLEELSKSRKVRVGLRPYMPDGKPI 410
GSSR+F GFNTDLDES++ IWKR G++ P LR + + +LS SRKVR+GLRPYMPDGKP+
Sbjct: 356 GSSREFAGFNTDLDESVITHIWKRVGDYFPKLRSLSVSDLSTSRKVRIGLRPYMPDGKPV 415
Query: 409 ISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLFGNPSEINYVPFS 266
I PV G+ V +AAGHEG GL++ALGTAEMV +++ G P +++ PF+
Sbjct: 416 IGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVDVVLGRPGKVDSAPFA 463
>gb|AFK38871.1| unknown [Medicago truncatula]
Length = 469
Score = 504 bits (1299), Expect = e-140
Identities = 255/468 (54%), Positives = 337/468 (72%), Gaps = 2/468 (0%)
Frame = -3
Query: 1663 HKHDSIYSAPFSSHHLSKSLTCPQTFKLHKITTKLSTRKNNYTLSPIVSASLPSLALEFD 1484
H H +S+ F SH S SLT ++ K ++ + S+S A FD
Sbjct: 6 HIHSINFSSVFPSHSSSSSLT------KRSLSYKYKFPATGNRMARLYSSS-DDRAKVFD 58
Query: 1483 VVIVGAGIIGLTIARQFLKESKLSVAVVDASVPCASGATGAGQGYIWMAGKTPGTELWEL 1304
VVIVGAGIIGLT+ARQFL +S LSVA+VD +PC SGATGAGQGY+WM KTPG+ W+L
Sbjct: 59 VVIVGAGIIGLTVARQFLMDSDLSVAIVDKGLPC-SGATGAGQGYLWMTHKTPGSATWDL 117
Query: 1303 GMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELSMLKDRVELLSEAGLRA 1124
MRS QLW +A+ ++EQG P+ ELGWKKTGSL++GR+ E MLK RV+ LSEAGL+A
Sbjct: 118 SMRSHQLWTMMAENLQEQGLDPIVELGWKKTGSLLVGRTRAESDMLKGRVKQLSEAGLKA 177
Query: 1123 EFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKENRSYGS--RYVEFFND 950
EFL S+L+K+EP + + AAFL DDCQLDA RTV +I+K NR++ S RY EF++D
Sbjct: 178 EFLGSSDLLKREPDLLVDKDTAAAFLPDDCQLDAHRTVAYIEKGNRNFASKGRYAEFYDD 237
Query: 949 PVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKNVVEKFDIVLDVPVKPR 770
PV +RS +G VE V+T KN+LY KKAV++AAG W+GSLM+++ + + VPV+PR
Sbjct: 238 PVKCFIRSDCNGGVEAVQTSKNTLYSKKAVIVAAGCWTGSLMQDLFRNWGMEFHVPVRPR 297
Query: 769 KGHLLVIENFNSIRLNHGLMEVGYMDHQVAAPSDSGVVDYSHTMSISMTATLDGAGNLVL 590
KGHLL ++NFNS++LNHGLME GY+DH + +S D+ +S+SMTAT+D AGNL++
Sbjct: 298 KGHLLALQNFNSLQLNHGLMEAGYVDHPSISDLESS--DHGRDLSVSMTATIDAAGNLLV 355
Query: 589 GSSRQFVGFNTDLDESIVDRIWKRAGEFIPSLRDVGLEELSKSRKVRVGLRPYMPDGKPI 410
GSSR+F GFNTDLDES++ IWKR G++ P LR + + +LS SRKV +GLRPYMPDGKP+
Sbjct: 356 GSSREFAGFNTDLDESVITHIWKRVGDYFPKLRSLSVSDLSTSRKVGIGLRPYMPDGKPV 415
Query: 409 ISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLFGNPSEINYVPFS 266
I PV G+ V +AAGHEG GL++ALGTAEMV + + G P +++ PF+
Sbjct: 416 IGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVDGVLGRPGKVDSAPFA 463
>ref|XP_004168063.1| PREDICTED: LOW QUALITY PROTEIN: D-amino acid dehydrogenase small
subunit-like [Cucumis sativus]
Length = 491
Score = 502 bits (1293), Expect = e-139
Identities = 255/453 (56%), Positives = 332/453 (73%), Gaps = 10/453 (2%)
Frame = -3
Query: 1579 HKITTKLSTRKNNY------TLSPIVSASLPSL---ALEFDVVIVGAGIIGLTIARQFLK 1427
H IT S N Y L + S+S PS A EFDVVI+GAGIIGLTIARQFL
Sbjct: 45 HSITLSFSNG-NRYRPVSFCALKDVKSSSSPSRNGNASEFDVVIIGAGIIGLTIARQFLI 103
Query: 1426 ESKLSVAVVDASVPCASGATGAGQGYIWMAGKTPGTELWELGMRSKQLWENLAKGIEEQG 1247
S LSVAVVD VPC SGATGAGQGY+WMA K+PG+++WEL +RS++LWE LA+ + +QG
Sbjct: 104 GSDLSVAVVDKEVPC-SGATGAGQGYLWMAHKSPGSDIWELALRSQRLWEGLAESLRDQG 162
Query: 1246 FSPLQELGWKKTGSLMIGRSLEELSMLKDRVELLSEAGLRAEFLSRSELVKKEPLVDAGN 1067
+P +ELGWKKTGSL+IGR+ +EL MLK +V S AGL AE+LS +L+ EP + G+
Sbjct: 163 LNPSEELGWKKTGSLLIGRTPDELDMLKRKVNQFSGAGLEAEYLSSVDLLSMEPALLIGD 222
Query: 1066 EGGAAFLHDDCQLDALRTVEFIQKENRSYGSRYVEFFNDPVIDVLRSSGSGEVEGVRTEK 887
GAAFL +DCQLDA T FIQK NR + RY EFF+DPV +LRS +G++E V+T K
Sbjct: 223 SCGAAFLPNDCQLDAYSTAAFIQKANRHFKGRYAEFFHDPVTGLLRSGSNGKIEAVQTSK 282
Query: 886 NSLYCKKAVVIAAGSWSGSLMKNVVEKFDIVLDVPVKPRKGHLLVIENFNSIRLNHGLME 707
+LY KKA+V+AAG WSG+L+++++ + VLDVP+ PRKGHLLVIENFNS+ +NHGLME
Sbjct: 283 TTLYSKKAIVLAAGCWSGTLLRDLLREGKTVLDVPIMPRKGHLLVIENFNSLHVNHGLME 342
Query: 706 VGYMDHQVAAPSDSGVVDYSHTMSISMTATLDGAGNLVLGSSRQFVGFNTDLDESIVDRI 527
VGY++HQ + D+ T S+SMTAT+D GNL+LGSSR+F GFNT+++E IV RI
Sbjct: 343 VGYVNHQALTLAK----DFEQTSSVSMTATMDVQGNLILGSSREFAGFNTEINEFIVARI 398
Query: 526 WKRAGEFIPSLRDVGLEELSKSRKVRVGLRPYM-PDGKPIISPVPGVPKVLVAAGHEGAG 350
W+RA EF P+L++V L ++ S KVR+GLRPY KP+I PVPG+ V +A+GHEG G
Sbjct: 399 WERASEFFPTLKEVSLSDIKHSSKVRIGLRPYSNAXWKPVIGPVPGLSNVFLASGHEGGG 458
Query: 349 LTLALGTAEMVFNMLFGNPSEINYVPFSFHGRC 251
L++A+GTAEM+ NM+ G+P +++ PF GRC
Sbjct: 459 LSMAMGTAEMIGNMVLGSPGKVDPAPFLVQGRC 491