BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027943
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    80   1e-13
emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]    77   1e-12
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    75   5e-12
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               74   1e-11
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    74   2e-11

>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/97 (39%), Positives = 57/97 (58%)
 Frame = -2

Query: 293 DGASSSANARPQCQICNKFGHLAIDCHNRMNHSYVGRIPPAKLAMLASMNEDCSDQTTSC 114
           +  S  +N +PQCQ+C K+GH+AI+C++R + +Y   +     AM+A+            
Sbjct: 244 NNVSGGSNGKPQCQVCGKYGHIAINCYHRFDQTYQPTMNNHLAAMVAT------------ 291

Query: 113 SSNQKDSLWYADTGATNHLTSDLSNLSLHTDYKGSDK 3
            S   D  WY DTGAT+HLT +L+ L+ HT + GSDK
Sbjct: 292 PSTVGDESWYMDTGATHHLTPNLNKLNSHTPFAGSDK 328


>emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]
          Length = 456

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = -2

Query: 305 TSSHDGASSSANARPQCQICNKFGHLAIDCHNRMNHSYVGRIPPAKL-AMLASMNEDCSD 129
           +SS    S  + +R  CQIC +  H A+DC+NRMN+++ GR PP +L AM+   N     
Sbjct: 272 SSSSPPVSHDSRSRSPCQICKRENHQALDCYNRMNYAFQGRHPPIELVAMVVEAN----- 326

Query: 128 QTTSCSSNQKDSLWYADTGATNHLTSDLSNLSLHTDYKGSD 6
            TT  + +Q    WY D+GA  H+TSD  NL++   Y+G+D
Sbjct: 327 -TTYLNQHQ----WYVDSGANIHVTSDTVNLAISQPYEGTD 362


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/94 (37%), Positives = 54/94 (57%)
 Frame = -2

Query: 284 SSSANARPQCQICNKFGHLAIDCHNRMNHSYVGRIPPAKLAMLASMNEDCSDQTTSCSSN 105
           +SS + +PQCQ+C KFGH A  C++R + S+ G       ++      +      S S+N
Sbjct: 280 NSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNN 339

Query: 104 QKDSLWYADTGATNHLTSDLSNLSLHTDYKGSDK 3
             D  WY D+GA++HLT +L NL+  + Y G+DK
Sbjct: 340 PADESWYLDSGASHHLTQNLGNLTSTSPYTGTDK 373


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/100 (37%), Positives = 55/100 (55%)
 Frame = -2

Query: 305 TSSHDGASSSANARPQCQICNKFGHLAIDCHNRMNHSYVGRIPPAKLAMLASMNEDCSDQ 126
           T++ +G S     R QCQIC++ GH AIDC NR+N SY GR+P ++L  + + +      
Sbjct: 288 TTTSNGNSFFNTGRIQCQICSRPGHSAIDCFNRLNLSYEGRVPSSRLNAMTAHH------ 341

Query: 125 TTSCSSNQKDSLWYADTGATNHLTSDLSNLSLHTDYKGSD 6
                 +  +  W  DTGA +H+T +L N+     YKG D
Sbjct: 342 ------SPSEETWLTDTGANSHVTPNLGNIDSPKSYKGLD 375


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -2

Query: 284 SSSANARPQCQICNKFGHLAIDCHNRMNHSYVGRIPPAKL-AMLASMNEDCSDQTTSCSS 108
           S   N RP CQIC K GH AIDC +R ++SY GR PP  L AM+A  N     Q      
Sbjct: 266 SQLPNNRPVCQICGKSGHTAIDCFHRFDYSYQGRFPPQDLAAMVAETNATFDHQ------ 319

Query: 107 NQKDSLWYADTGATNHLTSDLSNLS 33
                +WY D+GA  H+TSD +NL+
Sbjct: 320 -----VWYMDSGANAHITSDATNLT 339