BLASTX nr result

ID: Coptis23_contig00027942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027942
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15049.1| glutamate receptor 2.2 [Solanum lycopersicum]          70   2e-10
dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]          69   3e-10
gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana...    68   7e-10
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...    66   3e-09
emb|CBI23992.3| unnamed protein product [Vitis vinifera]               66   3e-09

>dbj|BAL15049.1| glutamate receptor 2.2 [Solanum lycopersicum]
          Length = 980

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/91 (38%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
 Frame = -1

Query: 276  AIDREWFGKQVSCQEQGTT--TSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYEHRNI 103
            ++ ++WFG +  C +   T  TS+SLTLDSFKGLF+IAG              +Y++R I
Sbjct: 825  SVIQKWFGNETDCTQNDETDITSDSLTLDSFKGLFLIAGVSAGSALLLFFLNFVYQNREI 884

Query: 102  ITSECSVSQKISAMAVEFDKEKDISSRGSKK 10
            + ++ S+ +K++A+A  FD+EKD S+  S++
Sbjct: 885  LATDDSICKKLTAIAKVFDQEKDDSNSTSEE 915


>dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
          Length = 965

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -1

Query: 273  IDREWFGKQVSCQEQ-GTTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYEHRNIIT 97
            I ++WFG +  C +Q G   + SLTLDSFKGLF+IAG              LY++R I+ 
Sbjct: 809  IIQKWFGNETECPKQDGMVIASSLTLDSFKGLFLIAGVSAGSALLLFFLIFLYQNREILA 868

Query: 96   SECSVSQKISAMAVEFDKEKDISSRGSKK 10
            ++ SV QK+ A+A  FDKEKD  +  S+K
Sbjct: 869  TDDSVWQKLCAIANAFDKEKDNPNSMSQK 897


>gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
          Length = 952

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -1

Query: 273  IDREWFGKQVSCQEQG--TTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYEHRNII 100
            I ++WFG +  C E+     TS+SLTLDSFKGLF+IAG              L+++R I+
Sbjct: 796  IIQKWFGNETDCPEKNGMLITSDSLTLDSFKGLFLIAGVSAGSALLTFLLIFLHQNREIL 855

Query: 99   TSECSVSQKISAMAVEFDKEKDISSRGSKK 10
             ++ S+ QK+SA+A  FD+ KD S+  S+K
Sbjct: 856  ATDDSIWQKLSALAKVFDEAKDNSNVKSEK 885


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 273  IDREWFGKQVSCQEQG--TTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYEHRNII 100
            I++EWFGK+ SC +    + +S +++LDSF GLF+IAG              L++HR ++
Sbjct: 805  IEKEWFGKKTSCSDDNGSSLSSNNISLDSFWGLFLIAGATSSLALIIGIAMFLHKHRVVV 864

Query: 99   TSECSVSQKISAMAVEFDKEKDISS 25
              E SVS+KI  +A  FD +KD+SS
Sbjct: 865  MGEDSVSEKIKTLATRFD-QKDLSS 888


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 273  IDREWFGKQVSCQEQG--TTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYEHRNII 100
            I++EWFGK+ SC +    + +S +++LDSF GLF+IAG              L++HR ++
Sbjct: 805  IEKEWFGKKTSCSDDNGSSLSSNNISLDSFWGLFLIAGATSSLALIIGIAMFLHKHRVVV 864

Query: 99   TSECSVSQKISAMAVEFDKEKDISS 25
              E SVS+KI  +A  FD +KD+SS
Sbjct: 865  MGEDSVSEKIKTLATRFD-QKDLSS 888


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