BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027934
         (1160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi...   624   e-176
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu...   614   e-173
ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|2...   608   e-172
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi...   602   e-170
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi...   602   e-170

>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
            chloroplastic [Vitis vinifera]
            gi|147852271|emb|CAN82234.1| hypothetical protein
            VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  624 bits (1610), Expect = e-176
 Identities = 300/386 (77%), Positives = 345/386 (89%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            PD AS TFLVN LCKRGNVGYA+QLV+K+EEYG P NTVTYNSLVRGLC+ GNL QSLQ+
Sbjct: 130  PDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQI 189

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            LD+F+++GLVPNVFTYSFLLEAAYKERGADEA+RLL+EI+AKGGKPNLVSYNVLLTGLCK
Sbjct: 190  LDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCK 249

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EGR EEA+ FFR LPSKGF PNVVSYNILLRSLC+EGRWE+A ELL+EM G +R+PSI+T
Sbjct: 250  EGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVT 309

Query: 541  YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
            +NILIGSLA HG+TD ALEVL++M+  RFK  AASYNPIIA+ CKEGK+DLVVKCLDQM+
Sbjct: 310  FNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMM 369

Query: 721  YRHCNPNDGTYNALAVLCGKGSVEEAFSIIQTLGNRQKLSMHDFYKNVITSLCRKGNTFA 900
            YR CNPN+GTYNA+AVLC +G V+EAFSIIQ+LGN+Q  S HDFYK VI+SLCRKGNT+ 
Sbjct: 370  YRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYP 429

Query: 901  AFQLLYEMTKNEFTPDSYTNSSLIRGLCMEGMLDEAMAIFEVMEENDYRPDIDNYNALLL 1080
            AFQLLYEMTK  F PDSYT SSLIRGLC EGMLDEAM IF +MEEN  RPD+DN+NAL+L
Sbjct: 430  AFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALIL 489

Query: 1081 GLCKAQRTDISLEVFEMMIEKAFMPN 1158
            GLCK ++TD+SL VFEMM++K +MPN
Sbjct: 490  GLCKCRKTDLSLMVFEMMVKKGYMPN 515



 Score =  123 bits (309), Expect = 8e-26
 Identities = 79/329 (24%), Positives = 154/329 (46%), Gaps = 1/329 (0%)
 Frame = +1

Query: 160  LQQSLQLLDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNV 339
            L  +   L+  + +G  P+    + L+    K     +A +++  +I  G  P+  S   
Sbjct: 78   LNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTF 137

Query: 340  LLTGLCKEGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDD 519
            L+  LCK G +  A+     +   G+  N V+YN L+R LC  G   ++ ++L + +   
Sbjct: 138  LVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKG 197

Query: 520  RTPSIITYNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVV 699
              P++ TY+ L+ +       D A+ +L+E+     KPN  SYN ++   CKEG+ +  +
Sbjct: 198  LVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAM 257

Query: 700  KCLDQMIYRHCNPNDGTYN-ALAVLCGKGSVEEAFSIIQTLGNRQKLSMHDFYKNVITSL 876
            +    +  +  +PN  +YN  L  LC +G  E+A  ++  +   ++      +  +I SL
Sbjct: 258  QFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSL 317

Query: 877  CRKGNTFAAFQLLYEMTKNEFTPDSYTNSSLIRGLCMEGMLDEAMAIFEVMEENDYRPDI 1056
               G T  A ++L +M++  F   + + + +I  LC EG +D  +   + M      P+ 
Sbjct: 318  ALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNE 377

Query: 1057 DNYNALLLGLCKAQRTDISLEVFEMMIEK 1143
              YNA+ + LC+  +   +  + + +  K
Sbjct: 378  GTYNAIAV-LCEEGKVQEAFSIIQSLGNK 405



 Score =  121 bits (304), Expect = 3e-25
 Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 1/278 (0%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            P+  SY  L+  LC  G    A +L+ +++     P+ VT+N L+  L + G   Q+L++
Sbjct: 270  PNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEV 329

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            LD   +        +Y+ ++    KE   D  ++ L++++ +   PN  +YN +   LC+
Sbjct: 330  LDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAV-LCE 388

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EG+++EA    +SL +K        Y  ++ SLC +G    A +LL EM      P   T
Sbjct: 389  EGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYT 448

Query: 541  YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
            Y+ LI  L   G  D A+E+   M     +P+  ++N +I   CK  K DL +   + M+
Sbjct: 449  YSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMV 508

Query: 721  YRHCNPNDGTYNALAV-LCGKGSVEEAFSIIQTLGNRQ 831
             +   PN+ TY  +   +  +  +E A ++++ L  RQ
Sbjct: 509  KKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQ 546



 Score =  109 bits (273), Expect = 1e-21
 Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
 Frame = +1

Query: 367  RLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIITYN 546
            RL +A  +   +  KG  P+      L+  LC   +  +A +++  M+G   TP   +  
Sbjct: 77   RLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCT 136

Query: 547  ILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMIYR 726
             L+ +L   G   +A++++E+M    +  N  +YN ++   C  G L   ++ LD+ + +
Sbjct: 137  FLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKK 196

Query: 727  HCNPNDGTYNALAVLCGK-GSVEEAFSIIQTLGNRQKLSMHDFYKNVITSLCRKGNTFAA 903
               PN  TY+ L     K    +EA  ++  +  +        Y  ++T LC++G T  A
Sbjct: 197  GLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 904  FQLLYEMTKNEFTPDSYTNSSLIRGLCMEGMLDEAMAIFEVMEENDYRPDIDNYNALLLG 1083
             Q   ++    F+P+  + + L+R LC EG  ++A  +   M+  +  P I  +N L+  
Sbjct: 257  MQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGS 316

Query: 1084 LCKAQRTDISLEVFEMMIEKAF 1149
            L    +TD +LEV + M    F
Sbjct: 317  LALHGQTDQALEVLDDMSRARF 338


>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
            melo]
          Length = 566

 Score =  614 bits (1583), Expect = e-173
 Identities = 296/386 (76%), Positives = 344/386 (89%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            PDA+SYTFLV+ LC++GNVGYA+QLVDK+EEYG P NTVTYNSLVRGLC+ GNL QSLQL
Sbjct: 130  PDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQL 189

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            LDR +Q+GLVPN +TYSFLLEAAYKERGADEA +LL+EIIAKGG+PNLVSYNVLLTGLCK
Sbjct: 190  LDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCK 249

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EGR E+AI  FR LPSKGF PNVVSYNILLRSLC+EGRWEEAN LL+EM GD+R+PS +T
Sbjct: 250  EGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVT 309

Query: 541  YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
            YNILIGSLA HGRT+HALEVLEEM   RFKP A+SYNPIIA  CK+GKLDLVVKCLDQM+
Sbjct: 310  YNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMM 369

Query: 721  YRHCNPNDGTYNALAVLCGKGSVEEAFSIIQTLGNRQKLSMHDFYKNVITSLCRKGNTFA 900
            YRHCNPN+GTYNA+A LC +G V+EAFSIIQ+LGN+Q  S  +FYK VITSLCRKGNT+ 
Sbjct: 370  YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYP 429

Query: 901  AFQLLYEMTKNEFTPDSYTNSSLIRGLCMEGMLDEAMAIFEVMEENDYRPDIDNYNALLL 1080
            AFQLLYEMTK  FTPDS+T SSLIRGLCMEGML+EA+ IF VMEEN+ +PD +NYN+L+L
Sbjct: 430  AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLIL 488

Query: 1081 GLCKAQRTDISLEVFEMMIEKAFMPN 1158
            G CK++RTD++L+VFE+M+ K ++PN
Sbjct: 489  GCCKSRRTDLALDVFEIMVGKGYLPN 514



 Score =  129 bits (325), Expect = 1e-27
 Identities = 85/309 (27%), Positives = 148/309 (47%), Gaps = 1/309 (0%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            P+  SY  L+  LCK G    AI+L  +L   G  PN V+YN L+R LC +G  +++  L
Sbjct: 235  PNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVL 294

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            L         P+  TY+ L+ +       + A+ +L E+I    KP   SYN ++  LCK
Sbjct: 295  LAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCK 354

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            +G+L+  +     +  +  +PN  +YN +  +LC EG  +EA  ++  +     + +   
Sbjct: 355  DGKLDLVVKCLDQMMYRHCNPNEGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHSSTQEF 413

Query: 541  YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
            Y I+I SL   G T  A ++L EM    F P++ +Y+ +I   C EG L+  ++    M 
Sbjct: 414  YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM- 472

Query: 721  YRHCNPNDGTYNALAVLCGKG-SVEEAFSIIQTLGNRQKLSMHDFYKNVITSLCRKGNTF 897
              +  P+   YN+L + C K    + A  + + +  +  L     Y  ++  +  +    
Sbjct: 473  EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMD 532

Query: 898  AAFQLLYEM 924
             A ++L E+
Sbjct: 533  LATKVLREL 541



 Score =  111 bits (277), Expect = 4e-22
 Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 35/277 (12%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            P+  SY  L+  LC  G    A  L+ ++      P+TVTYN L+  L + G  + +L++
Sbjct: 270  PNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEV 329

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            L+  ++    P   +Y+ ++    K+   D  ++ L++++ +   PN  +YN + T LC+
Sbjct: 330  LEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCE 388

Query: 361  EGRLEEAIGFFRSLPSK-----------------------------------GFDPNVVS 435
            EG ++EA    +SL +K                                   GF P+  +
Sbjct: 389  EGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFT 448

Query: 436  YNILLRSLCHEGRWEEANELLSEMVGDDRTPSIITYNILIGSLAHHGRTDHALEVLEEMA 615
            Y+ L+R LC EG   EA E+ S M  +++ P    YN LI       RTD AL+V E M 
Sbjct: 449  YSSLIRGLCMEGMLNEAIEIFSVMEENNK-PDTENYNSLILGCCKSRRTDLALDVFEIMV 507

Query: 616  HGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMIYR 726
               + PN  +Y  ++     E ++DL  K L ++  R
Sbjct: 508  GKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLR 544


>ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|222860088|gb|EEE97635.1|
            predicted protein [Populus trichocarpa]
          Length = 455

 Score =  608 bits (1568), Expect = e-172
 Identities = 289/386 (74%), Positives = 337/386 (87%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            PDAASYTFLVN LCKRGN+G+A+QLV+K+EE G P NTVTYNSLVRGLC+ GNL QSLQL
Sbjct: 18   PDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQL 77

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            LD+ + +GLVPN FTYSFLLEAAYKERG +EAM+LL+EIIAKG +PNLVSYNVLLTGLCK
Sbjct: 78   LDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCK 137

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EGR EEAI FFR LPSKGF+PNVVSYNI+LRSLCHEGRWEEAN+LL+EM  ++R+PS++T
Sbjct: 138  EGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVT 197

Query: 541  YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
            YNILIGSLA HGR +HA EVL+EM    FKP+A +YNPIIA  CKEGKLDLV+KCLDQMI
Sbjct: 198  YNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMI 257

Query: 721  YRHCNPNDGTYNALAVLCGKGSVEEAFSIIQTLGNRQKLSMHDFYKNVITSLCRKGNTFA 900
            +  CNPN+GT+NA+AVLC +G V EAFSIIQ LGN+Q+ S HDFYK VITSLCRKGNT+ 
Sbjct: 258  HHRCNPNEGTFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYP 317

Query: 901  AFQLLYEMTKNEFTPDSYTNSSLIRGLCMEGMLDEAMAIFEVMEENDYRPDIDNYNALLL 1080
            AFQLLYEMTK  F PD YT SSLIRGLC+EGMLDEA+ IF ++EENDYRP +DN+NAL+L
Sbjct: 318  AFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALIL 377

Query: 1081 GLCKAQRTDISLEVFEMMIEKAFMPN 1158
            G CK+ RTD+SL++ EMM+EK + PN
Sbjct: 378  GFCKSGRTDLSLDILEMMVEKGYTPN 403



 Score =  132 bits (332), Expect = 2e-28
 Identities = 75/254 (29%), Positives = 127/254 (50%)
 Frame = +1

Query: 1   PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
           P+  SY  ++  LC  G    A QL+ +++     P+ VTYN L+  L   G ++ + ++
Sbjct: 158 PNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEV 217

Query: 181 LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
           LD  ++    P+  TY+ ++    KE   D  ++ L+++I     PN  ++N +   LCK
Sbjct: 218 LDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAV-LCK 276

Query: 361 EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
           +GR+ EA    ++L +K        Y  ++ SLC +G    A +LL EM      P   T
Sbjct: 277 QGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYT 336

Query: 541 YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
           Y+ LI  L   G  D ALE+   +    ++P   ++N +I  FCK G+ DL +  L+ M+
Sbjct: 337 YSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMV 396

Query: 721 YRHCNPNDGTYNAL 762
            +   PN+ TY  +
Sbjct: 397 EKGYTPNETTYTII 410



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 34/204 (16%)
 Frame = +1

Query: 1   PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSL---------------- 132
           P A +Y  ++  LCK G +   I+ +D++  + C PN  T+N++                
Sbjct: 228 PSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAVLCKQGRVPEAFSII 287

Query: 133 ------------------VRGLCIQGNLQQSLQLLDRFLQRGLVPNVFTYSFLLEAAYKE 258
                             +  LC +GN   + QLL    + G VP+ +TYS L+     E
Sbjct: 288 QNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIE 347

Query: 259 RGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCKEGRLEEAIGFFRSLPSKGFDPNVVSY 438
              DEA+ +   +     +P L ++N L+ G CK GR + ++     +  KG+ PN  +Y
Sbjct: 348 GMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTY 407

Query: 439 NILLRSLCHEGRWEEANELLSEMV 510
            I++  + HE   E A E+L E++
Sbjct: 408 TIIVEGIAHEEEKELAAEVLKELL 431


>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
            chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  602 bits (1551), Expect = e-170
 Identities = 291/386 (75%), Positives = 339/386 (87%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            PDAASYTFLV+ LC++GNVGYA+QLVDK+EEYG P NT TYNSLVRGLC+ GNL QSLQL
Sbjct: 130  PDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQL 189

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            LDR +Q+GLVPN +TYSFLLEAAYKERGADEA +LL+EIIAKGGKPNLVSYNVLLTGLCK
Sbjct: 190  LDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCK 249

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EGR E+A+  FR LPSKGF PNVVSYNILLRSLC+EGRWEEAN LL+EM GD+R+PS +T
Sbjct: 250  EGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVT 309

Query: 541  YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
            YNILIGSL  HGRT+HALEVLEEM   RFKP A+SYNPIIA+ CK+ K+DLVVKCLDQM+
Sbjct: 310  YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMM 369

Query: 721  YRHCNPNDGTYNALAVLCGKGSVEEAFSIIQTLGNRQKLSMHDFYKNVITSLCRKGNTFA 900
            YRHCNPN+GTYNA+A LC +G V+EAFSIIQ+LGN+Q  S  +FYK VITSLCRKGNT+ 
Sbjct: 370  YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYP 429

Query: 901  AFQLLYEMTKNEFTPDSYTNSSLIRGLCMEGMLDEAMAIFEVMEENDYRPDIDNYNALLL 1080
            AFQLLYEMTK  FTPDS+T SSLIRGLCMEGML+EA+ IF VMEEN  + D +NYN+L+L
Sbjct: 430  AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLIL 488

Query: 1081 GLCKAQRTDISLEVFEMMIEKAFMPN 1158
            G CK++RTD++L+VFE+M+ K ++ N
Sbjct: 489  GCCKSRRTDLALDVFEIMVGKGYLAN 514



 Score =  107 bits (266), Expect = 7e-21
 Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            P+  SY  L+  LC  G    A  L+ +++     P+TVTYN L+  L + G  + +L++
Sbjct: 270  PNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEV 329

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            L+  ++    P   +Y+ ++    K+R  D  ++ L++++ +   PN  +YN + T LC+
Sbjct: 330  LEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCE 388

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EG ++EA    +SL +K        Y I++ SLC +G    A +LL EM     TP   T
Sbjct: 389  EGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFT 448

Query: 541  YNILIGSLAHHG----------------------------------RTDHALEVLEEMAH 618
            Y+ LI  L   G                                  RTD AL+V E M  
Sbjct: 449  YSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVG 508

Query: 619  GRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMIYR 726
              +  N  +Y  ++     E ++DL  + L ++  R
Sbjct: 509  KGYLANETTYTILVEGIIHEKEMDLATEVLRELQLR 544


>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
            chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  602 bits (1551), Expect = e-170
 Identities = 291/386 (75%), Positives = 339/386 (87%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            PDAASYTFLV+ LC++GNVGYA+QLVDK+EEYG P NT TYNSLVRGLC+ GNL QSLQL
Sbjct: 130  PDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQL 189

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            LDR +Q+GLVPN +TYSFLLEAAYKERGADEA +LL+EIIAKGGKPNLVSYNVLLTGLCK
Sbjct: 190  LDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCK 249

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EGR E+A+  FR LPSKGF PNVVSYNILLRSLC+EGRWEEAN LL+EM GD+R+PS +T
Sbjct: 250  EGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVT 309

Query: 541  YNILIGSLAHHGRTDHALEVLEEMAHGRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMI 720
            YNILIGSL  HGRT+HALEVLEEM   RFKP A+SYNPIIA+ CK+ K+DLVVKCLDQM+
Sbjct: 310  YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMM 369

Query: 721  YRHCNPNDGTYNALAVLCGKGSVEEAFSIIQTLGNRQKLSMHDFYKNVITSLCRKGNTFA 900
            YRHCNPN+GTYNA+A LC +G V+EAFSIIQ+LGN+Q  S  +FYK VITSLCRKGNT+ 
Sbjct: 370  YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYP 429

Query: 901  AFQLLYEMTKNEFTPDSYTNSSLIRGLCMEGMLDEAMAIFEVMEENDYRPDIDNYNALLL 1080
            AFQLLYEMTK  FTPDS+T SSLIRGLCMEGML+EA+ IF VMEEN  + D +NYN+L+L
Sbjct: 430  AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLIL 488

Query: 1081 GLCKAQRTDISLEVFEMMIEKAFMPN 1158
            G CK++RTD++L+VFE+M+ K ++ N
Sbjct: 489  GCCKSRRTDLALDVFEIMVGKGYLAN 514



 Score =  107 bits (266), Expect = 7e-21
 Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
 Frame = +1

Query: 1    PDAASYTFLVNQLCKRGNVGYAIQLVDKLEEYGCPPNTVTYNSLVRGLCIQGNLQQSLQL 180
            P+  SY  L+  LC  G    A  L+ +++     P+TVTYN L+  L + G  + +L++
Sbjct: 270  PNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEV 329

Query: 181  LDRFLQRGLVPNVFTYSFLLEAAYKERGADEAMRLLNEIIAKGGKPNLVSYNVLLTGLCK 360
            L+  ++    P   +Y+ ++    K+R  D  ++ L++++ +   PN  +YN + T LC+
Sbjct: 330  LEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCE 388

Query: 361  EGRLEEAIGFFRSLPSKGFDPNVVSYNILLRSLCHEGRWEEANELLSEMVGDDRTPSIIT 540
            EG ++EA    +SL +K        Y I++ SLC +G    A +LL EM     TP   T
Sbjct: 389  EGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFT 448

Query: 541  YNILIGSLAHHG----------------------------------RTDHALEVLEEMAH 618
            Y+ LI  L   G                                  RTD AL+V E M  
Sbjct: 449  YSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVG 508

Query: 619  GRFKPNAASYNPIIAQFCKEGKLDLVVKCLDQMIYR 726
              +  N  +Y  ++     E ++DL  + L ++  R
Sbjct: 509  KGYLANETTYTILVEGIIHEKEMDLATEVLRELQLR 544