BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027933
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,...    65   1e-08
ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|222847803|gb|EEE85350.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/43 (79%), Positives = 40/43 (93%)
 Frame = -2

Query: 630 IIVEGIAHEEDLELAADVLKALYVRQVVSRNTVERLVMQYDLE 502
           I+VEGIAHEE+ ELAA+VLK LY+RQV+ RNTVERLVMQYDL+
Sbjct: 521 ILVEGIAHEEEKELAAEVLKELYIRQVMRRNTVERLVMQYDLK 563


>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
           gi|147852271|emb|CAN82234.1| hypothetical protein
           VITISV_038804 [Vitis vinifera]
          Length = 567

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -2

Query: 630 IIVEGIAHEEDLELAADVLKALYVRQVVSRNTVERLVMQYDLE 502
           IIVEGIAH+E++ELAA VLK LY+RQ V R+T+ERLVMQYDLE
Sbjct: 521 IIVEGIAHQEEMELAAAVLKELYLRQAVGRSTLERLVMQYDLE 563


>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/43 (69%), Positives = 40/43 (93%)
 Frame = -2

Query: 630 IIVEGIAHEEDLELAADVLKALYVRQVVSRNTVERLVMQYDLE 502
           I+VEGI HEE+ ELAA+VL+ L++RQV+S++TVERL+MQYDLE
Sbjct: 521 ILVEGIIHEEEKELAAEVLRELHLRQVMSQSTVERLIMQYDLE 563


>ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|222860088|gb|EEE97635.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = -2

Query: 630 IIVEGIAHEEDLELAADVLKALYVRQVVSRNTVERLVMQYDLE 502
           IIVEGIAHEE+ ELAA+VLK L +RQV+ RNT ERLV+QY+LE
Sbjct: 409 IIVEGIAHEEEKELAAEVLKELLLRQVMRRNTAERLVLQYNLE 451


>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 39/47 (82%)
 Frame = -2

Query: 630 IIVEGIAHEEDLELAADVLKALYVRQVVSRNTVERLVMQYDLE*IAL 490
           I+VEGI HE++++LA +VL+ L +R V++++TVERLVMQYDL  + L
Sbjct: 520 ILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLVMQYDLNELPL 566