BLASTX nr result

ID: Coptis23_contig00027927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027927
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301374.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002276925.1| PREDICTED: WRKY transcription factor 22 [Vit...   110   9e-23
gb|ACV92025.1| WRKY transcription factor 23 [(Populus tomentosa ...   108   5e-22
ref|XP_002320158.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_002511920.1| WRKY transcription factor, putative [Ricinus...   108   6e-22

>ref|XP_002301374.1| predicted protein [Populus trichocarpa] gi|222843100|gb|EEE80647.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  112 bits (280), Expect = 3e-23
 Identities = 65/148 (43%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
 Frame = +3

Query: 18  DLFETKTVLDEFEQLYKXXXXXXXXXXXXXXXXXXXXXISFXXXXXXXXXXXHRVSVRMK 197
           D FET+ V+ E ++LYK                      S             +   + +
Sbjct: 41  DPFETRNVIGELDELYKPFFPKTQPLLYSPQACTPISSFSSFASFNKDL----QTQPKQQ 96

Query: 198 QEQQQPRRTIAASTTIS----TPXXXXXXXXXXXXXXXXPAEGLSSDMWAWRKYGQKPIK 365
           Q++ QP++++A S T S    TP                PAE LSSD+WAWRKYGQKPIK
Sbjct: 97  QKKSQPKQSLAGSVTSSGNSHTPRSKRRKNQLKKVCQV-PAEALSSDVWAWRKYGQKPIK 155

Query: 366 GSPYPRGYYRCSSSKGCLARKQVERSRS 449
           GSPYPRGYYRCSSSKGCLARKQVER+RS
Sbjct: 156 GSPYPRGYYRCSSSKGCLARKQVERNRS 183


>ref|XP_002276925.1| PREDICTED: WRKY transcription factor 22 [Vitis vinifera]
           gi|297745327|emb|CBI40407.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/95 (58%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
 Frame = +3

Query: 174 HRVSVRMKQEQQQPRRTIAAS---TTISTPXXXXXXXXXXXXXXXXPAEGLSSDMWAWRK 344
           H++  + KQ+    + + A+S   TT S                  PAEGLSSDMWAWRK
Sbjct: 115 HQIQQQQKQDPPPSKHSHASSVPSTTHSQSPRSKRRKNQMKKVCHIPAEGLSSDMWAWRK 174

Query: 345 YGQKPIKGSPYPRGYYRCSSSKGCLARKQVERSRS 449
           YGQKPIKGSPYPRGYYRCSSSKGCLARKQVER+RS
Sbjct: 175 YGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRS 209


>gb|ACV92025.1| WRKY transcription factor 23 [(Populus tomentosa x P. bolleana) x
           P. tomentosa]
          Length = 350

 Score =  108 bits (270), Expect = 5e-22
 Identities = 65/152 (42%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
 Frame = +3

Query: 6   FSFPDLFETKTVLDEFEQLYKXXXXXXXXXXXXXXXXXXXXXISFXXXXXXXXXXXHRVS 185
           FS PD FET+  + E  +LYK                      S             +  
Sbjct: 64  FSHPDPFETRNAIGELHELYKPFFPKSQQPIYSPQACTPLSSFSSFTSFT-------KEQ 116

Query: 186 VRMKQEQQQPRRTIAASTTIS----TPXXXXXXXXXXXXXXXXPAEGLSSDMWAWRKYGQ 353
            + +Q+Q QP++    S T S    TP                P   LSSD+WAWRKYGQ
Sbjct: 117 PQQQQKQSQPKQFHTGSVTSSANSHTPRSKRRKNQLKKVCQV-PVAALSSDVWAWRKYGQ 175

Query: 354 KPIKGSPYPRGYYRCSSSKGCLARKQVERSRS 449
           KPIKGSPYPRGYYRCSSSKGCLARKQVER+RS
Sbjct: 176 KPIKGSPYPRGYYRCSSSKGCLARKQVERNRS 207


>ref|XP_002320158.1| predicted protein [Populus trichocarpa] gi|222860931|gb|EEE98473.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  108 bits (270), Expect = 5e-22
 Identities = 65/153 (42%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
 Frame = +3

Query: 3   FFSFPDLFETKTVLDEFEQLYKXXXXXXXXXXXXXXXXXXXXXISFXXXXXXXXXXXHRV 182
           F  F + FET+  + E  +LYK                      S             + 
Sbjct: 51  FSGFGNPFETRNAIGELHELYKPFFPKSQQPIYSPQACTPLSSFSSFTSFT-------KE 103

Query: 183 SVRMKQEQQQPRRTIAASTTIS----TPXXXXXXXXXXXXXXXXPAEGLSSDMWAWRKYG 350
             + +Q+Q QP+++   S T S    TP                PAE LSSD+WAWRKYG
Sbjct: 104 QPQQQQKQSQPKQSQTGSVTSSANSHTPRSKRRKNQLKKVCQV-PAEALSSDVWAWRKYG 162

Query: 351 QKPIKGSPYPRGYYRCSSSKGCLARKQVERSRS 449
           QKPIKGSPYPRGYYRCSSSKGCLARKQVER+RS
Sbjct: 163 QKPIKGSPYPRGYYRCSSSKGCLARKQVERNRS 195


>ref|XP_002511920.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223549100|gb|EEF50589.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 347

 Score =  108 bits (269), Expect = 6e-22
 Identities = 65/152 (42%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
 Frame = +3

Query: 6   FSFPDLFETKT--VLDEFEQLYKXXXXXXXXXXXXXXXXXXXXXISFXXXXXXXXXXXHR 179
           FS PD FET+   V  E  +LYK                     +              +
Sbjct: 65  FSTPDPFETRNNNVTGELHELYKPFFPKSHQTTTC---------LYTPQGAPISPVVISK 115

Query: 180 VSVRMKQEQQQPRRTIAASTTIS--TPXXXXXXXXXXXXXXXXPAEGLSSDMWAWRKYGQ 353
              ++K + QQP+++   S T S  +                 PAE LSSD+WAWRKYGQ
Sbjct: 116 EQTQLKLQHQQPKQSHTGSVTSSANSQTRSKRRKNQLKKICQVPAEALSSDVWAWRKYGQ 175

Query: 354 KPIKGSPYPRGYYRCSSSKGCLARKQVERSRS 449
           KPIKGSPYPRGYYRCSSSKGCLARKQVER+RS
Sbjct: 176 KPIKGSPYPRGYYRCSSSKGCLARKQVERNRS 207


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