BLASTX nr result

ID: Coptis23_contig00027909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027909
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15276.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002271787.1| PREDICTED: nitrate transporter 1.2-like [Vit...   123   1e-26
ref|XP_002511519.1| nitrate transporter, putative [Ricinus commu...   117   1e-24
ref|XP_002311879.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002269693.2| PREDICTED: nitrate transporter 1.2-like [Vit...   114   1e-23

>emb|CBI15276.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/122 (54%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = +1

Query: 1   LSIPIFLLGSATYRNKVPTGSPLTTIAKVLAAAMLNTXXXXXXXXXXXXXXTSPAYQIEC 180
           +SIPIFLLGSATYR K+PTGSP+TTI KVL AA+ N               TSP+Y  E 
Sbjct: 260 ISIPIFLLGSATYRTKIPTGSPITTIVKVLVAAICNAYKLRNCSNSVMSMATSPSYTTEI 319

Query: 181 TEVEDK-AKEEIPTKTKTKGIKFLDKAVEYKPIHQMLFCTKEQVEEVKIIGKILPIFACT 357
              E+  +KE +P +  T+ +KFL+ AV  KP H  L CT +QVEEVKI+ +ILPIFACT
Sbjct: 320 GGKEESCSKEMVPRQAPTESLKFLNNAVIDKPFHSALECTVKQVEEVKIVLRILPIFACT 379

Query: 358 IM 363
           IM
Sbjct: 380 IM 381


>ref|XP_002271787.1| PREDICTED: nitrate transporter 1.2-like [Vitis vinifera]
          Length = 579

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/122 (54%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = +1

Query: 1   LSIPIFLLGSATYRNKVPTGSPLTTIAKVLAAAMLNTXXXXXXXXXXXXXXTSPAYQIEC 180
           +SIPIFLLGSATYR K+PTGSP+TTI KVL AA+ N               TSP+Y  E 
Sbjct: 229 ISIPIFLLGSATYRTKIPTGSPITTIVKVLVAAICNAYKLRNCSNSVMSMATSPSYTTEI 288

Query: 181 TEVEDK-AKEEIPTKTKTKGIKFLDKAVEYKPIHQMLFCTKEQVEEVKIIGKILPIFACT 357
              E+  +KE +P +  T+ +KFL+ AV  KP H  L CT +QVEEVKI+ +ILPIFACT
Sbjct: 289 GGKEESCSKEMVPRQAPTESLKFLNNAVIDKPFHSALECTVKQVEEVKIVLRILPIFACT 348

Query: 358 IM 363
           IM
Sbjct: 349 IM 350


>ref|XP_002511519.1| nitrate transporter, putative [Ricinus communis]
           gi|223550634|gb|EEF52121.1| nitrate transporter,
           putative [Ricinus communis]
          Length = 591

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = +1

Query: 1   LSIPIFLLGSATYRNKVPTGSPLTTIAKVLAAAMLNTXXXXXXXXXXXXXXTSPAYQIEC 180
           LSIP+FLLGS TYRNKVP+GSP+TTI KVL AA+ NT              TS +Y  E 
Sbjct: 229 LSIPVFLLGSPTYRNKVPSGSPITTILKVLIAAVYNTCKPQTPNNAVMGVDTSSSYTTET 288

Query: 181 TEVEDK-AKEEIPTKTKTKGIKFLDKAVEYKPIHQMLFCTKEQVEEVKIIGKILPIFACT 357
           +EVED   +EE   +T T+ ++FLD+AV  K I+  L CT + VEEVK++ KILPIF  T
Sbjct: 289 SEVEDSYIREEALNQTPTESLEFLDRAVMNKSINPTLRCTVKDVEEVKVVIKILPIFMST 348

Query: 358 IM 363
           IM
Sbjct: 349 IM 350


>ref|XP_002311879.1| predicted protein [Populus trichocarpa] gi|222851699|gb|EEE89246.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/122 (52%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
 Frame = +1

Query: 1   LSIPIFLLGSATYRNKVPTGSPLTTIAKVLAAAMLNTXXXXXXXXXXXXXXTSPAYQIEC 180
           LSIPIFL GSA YRNK+P+GSPL TI+KVL AA +NT              TSP+     
Sbjct: 229 LSIPIFLAGSAAYRNKIPSGSPLATISKVLVAAGVNTCMSRSSGNAIASLTTSPSNPNPT 288

Query: 181 T-EVEDKAKEEIPTKTKTKGIKFLDKAVEYKPIHQMLFCTKEQVEEVKIIGKILPIFACT 357
           + +  D +   +P +T TK + +L+KAV  KPIH  L CT +QVEEVKI+ KI PIFACT
Sbjct: 289 SKDAIDNSIAVMPAETPTKSLDWLNKAVVNKPIHSALECTVQQVEEVKIVIKIFPIFACT 348

Query: 358 IM 363
           IM
Sbjct: 349 IM 350


>ref|XP_002269693.2| PREDICTED: nitrate transporter 1.2-like [Vitis vinifera]
          Length = 616

 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +1

Query: 4   SIPIFLLGSATYRNKVPTGSPLTTIAKVLAAAMLNTXXXXXXXXXXXXXXTSPAYQIECT 183
           SIP+FL GSATYRNK+P+GSPLTTI KVL AA LN               TSP+Y  + +
Sbjct: 261 SIPVFLGGSATYRNKIPSGSPLTTIFKVLIAATLNRSPSNAVASMA----TSPSYPTQNS 316

Query: 184 EV--EDKAKEEIPTKTKTKGIKFLDKAVEYKPIHQMLFCTKEQVEEVKIIGKILPIFACT 357
           +   E+  K  +P +T T+ + FL++AV  KP+++ + CT +QVEEVKI+ KILPIFACT
Sbjct: 317 KEPEEENGKAIVPAQTPTESLGFLNRAVVNKPVYKAVECTVQQVEEVKIVIKILPIFACT 376

Query: 358 IM 363
           IM
Sbjct: 377 IM 378


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