BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027905
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   125   4e-27
ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small ...   124   6e-27
ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   124   6e-27
ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   123   1e-26

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/83 (78%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   NALSADIDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGL 180
           NALS DI+NEIV +HNFIR +YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GL
Sbjct: 139 NALSVDIENEIVIIHNFIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGL 198

Query: 181 LPSDSIM--AVIASTTSGKPLPE 243
           LPS  IM  +V ASTTSGKPLPE
Sbjct: 199 LPSAIIMVVSVTASTTSGKPLPE 221


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/83 (78%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   NALSADIDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGL 180
           NALS DI+NEIV +HNFIR +YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GL
Sbjct: 105 NALSVDIENEIVIIHNFIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGL 164

Query: 181 LPSDSIM--AVIASTTSGKPLPE 243
           LPS  IM  +V ASTTSGKPLPE
Sbjct: 165 LPSAIIMVVSVTASTTSGKPLPE 187


>ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear
           ribonucleoprotein Prp31-like [Cucumis sativus]
          Length = 484

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/83 (77%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   NALSADIDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGL 180
           NALS DI+NEI+ +HNFIR  YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GL
Sbjct: 100 NALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGL 159

Query: 181 LPSDSIM--AVIASTTSGKPLPE 243
           LPS  IM  +V ASTTSGKPLPE
Sbjct: 160 LPSAVIMVVSVTASTTSGKPLPE 182


>ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Cucumis sativus]
          Length = 476

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/83 (77%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   NALSADIDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGL 180
           NALS DI+NEI+ +HNFIR  YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GL
Sbjct: 92  NALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGL 151

Query: 181 LPSDSIM--AVIASTTSGKPLPE 243
           LPS  IM  +V ASTTSGKPLPE
Sbjct: 152 LPSAVIMVVSVTASTTSGKPLPE 174


>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/83 (77%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   NALSADIDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGL 180
           NALS DI+NEIV +HNFIR  YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GL
Sbjct: 102 NALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGL 161

Query: 181 LPSDSIM--AVIASTTSGKPLPE 243
           LPS  IM  +V ASTT+GKPLPE
Sbjct: 162 LPSAIIMVVSVTASTTTGKPLPE 184