BLASTX nr result

ID: Coptis23_contig00027881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027881
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase...   223   6e-56
emb|CAN70737.1| hypothetical protein VITISV_008287 [Vitis vinifera]   216   8e-54
ref|XP_002511834.1| protein with unknown function [Ricinus commu...   202   7e-50
ref|XP_003618981.1| Double-stranded RNA-specific adenosine deami...   202   9e-50
ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase...   199   7e-49

>ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase 1 [Vitis vinifera]
           gi|297745247|emb|CBI40327.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  223 bits (567), Expect = 6e-56
 Identities = 115/190 (60%), Positives = 137/190 (72%)
 Frame = -3

Query: 795 VIGALLSYFIQPVYISSMIVGKYLRQSAAVPLESHLRRAVTERILPLANKLMSPFRVNKP 616
           V GALLSYF+QPVY+SS+ VG+        PLE +LRRA+  R LPL++KL SPF+VN+P
Sbjct: 264 VQGALLSYFLQPVYLSSITVGESHTSPKIFPLEDNLRRALYNRALPLSDKLKSPFQVNQP 323

Query: 615 QILEAPMPPEEFQQSESASLTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGAMYPSSE 436
              +AP+PP+EFQ SE+A+ TLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGA+Y S+E
Sbjct: 324 LFWKAPIPPKEFQHSETATTTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALYASTE 383

Query: 435 SSXXXXXXXXXXXXXRHKCPTESQDDEISYQRLKAGAQEYRLISSIFKESSPFCNWLLKP 256
            S              HK   ES  +E+SY+ LK GAQEY   S IFK S PF  WLLK 
Sbjct: 384 PSLCKKRLLEVFLLLMHKTSIESPANEVSYRELKDGAQEYCSASKIFKGSPPFNGWLLKA 443

Query: 255 LDLEAFSI*R 226
           L+LEAFS+ R
Sbjct: 444 LNLEAFSVVR 453


>emb|CAN70737.1| hypothetical protein VITISV_008287 [Vitis vinifera]
          Length = 694

 Score =  216 bits (549), Expect = 8e-54
 Identities = 111/188 (59%), Positives = 133/188 (70%)
 Frame = -3

Query: 795 VIGALLSYFIQPVYISSMIVGKYLRQSAAVPLESHLRRAVTERILPLANKLMSPFRVNKP 616
           V GALLSY +QPVY+SS+ VG+        PLE +LRRA+  R LPL++KL SPF+VN+P
Sbjct: 131 VQGALLSYXLQPVYLSSITVGZSHTSPKXFPLEDNLRRALYNRALPLSDKLKSPFQVNQP 190

Query: 615 QILEAPMPPEEFQQSESASLTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGAMYPSSE 436
              +AP+PP+EFQ SE+A+ TLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGA+Y S+E
Sbjct: 191 LFWKAPIPPKEFQHSETATTTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALYASTE 250

Query: 435 SSXXXXXXXXXXXXXRHKCPTESQDDEISYQRLKAGAQEYRLISSIFKESSPFCNWLLKP 256
            S              HK   ES  +E+ Y+ LK GAQEY   S IFK S PF  WLLK 
Sbjct: 251 PSLCKKRLLEVFLLLMHKTSIESPANEVXYRELKDGAQEYCSASKIFKGSPPFNGWLLKA 310

Query: 255 LDLEAFSI 232
           L+LEAF +
Sbjct: 311 LNLEAFXV 318


>ref|XP_002511834.1| protein with unknown function [Ricinus communis]
           gi|223549014|gb|EEF50503.1| protein with unknown
           function [Ricinus communis]
          Length = 443

 Score =  202 bits (515), Expect = 7e-50
 Identities = 104/190 (54%), Positives = 130/190 (68%)
 Frame = -3

Query: 795 VIGALLSYFIQPVYISSMIVGKYLRQSAAVPLESHLRRAVTERILPLANKLMSPFRVNKP 616
           V GALLSY +QP+Y+SS+ VG+    S    LE+ L+ ++ +RILPL+NKL++PF+VNKP
Sbjct: 221 VQGALLSYLLQPIYLSSITVGQSPNSSEHFQLENCLQLSLCDRILPLSNKLIAPFQVNKP 280

Query: 615 QILEAPMPPEEFQQSESASLTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGAMYPSSE 436
               AP+PP EFQ +++A   LTCGYSICWNKSGLHEV+LGTTGR+QGTSAKGA+ PS+ 
Sbjct: 281 LFCSAPVPPREFQHADTALANLTCGYSICWNKSGLHEVVLGTTGRRQGTSAKGALSPSTR 340

Query: 435 SSXXXXXXXXXXXXXRHKCPTESQDDEISYQRLKAGAQEYRLISSIFKESSPFCNWLLKP 256
           S              R     E +D EISY+ LK  A+ Y   S  FK S PF NW LKP
Sbjct: 341 SFLCKKQVLEMFLILREDMQHEDRDKEISYRELKNSAEAYSQTSKTFKRSPPFDNWPLKP 400

Query: 255 LDLEAFSI*R 226
           +DLEAFSI R
Sbjct: 401 MDLEAFSILR 410


>ref|XP_003618981.1| Double-stranded RNA-specific adenosine deaminase [Medicago
           truncatula] gi|355493996|gb|AES75199.1| Double-stranded
           RNA-specific adenosine deaminase [Medicago truncatula]
          Length = 413

 Score =  202 bits (514), Expect = 9e-50
 Identities = 104/186 (55%), Positives = 127/186 (68%)
 Frame = -3

Query: 789 GALLSYFIQPVYISSMIVGKYLRQSAAVPLESHLRRAVTERILPLANKLMSPFRVNKPQI 610
           GALLSYF+QPVY+SS+ VG           E +L+RA+ +RI+ L N L SPF VN+P  
Sbjct: 226 GALLSYFLQPVYLSSITVGLPHTSPENFQFEDNLKRALYDRIVHLENALTSPFLVNQPLF 285

Query: 609 LEAPMPPEEFQQSESASLTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGAMYPSSESS 430
             AP+PP +F QSES++  LTCGYSICWN+ GLHEV LGTTGRKQGTSAKGA+YPS+ESS
Sbjct: 286 QAAPVPPNDFLQSESSANNLTCGYSICWNECGLHEVTLGTTGRKQGTSAKGALYPSTESS 345

Query: 429 XXXXXXXXXXXXXRHKCPTESQDDEISYQRLKAGAQEYRLISSIFKESSPFCNWLLKPLD 250
                        R +   +S DD+I+Y+ LK GA+EY L S IFK   PF NW +KPLD
Sbjct: 346 LCKKRLLEVFLPLREEFLAKSLDDDITYRELKDGAEEYHLASKIFKGKPPFSNWFVKPLD 405

Query: 249 LEAFSI 232
            EAF I
Sbjct: 406 CEAFPI 411


>ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]
          Length = 407

 Score =  199 bits (506), Expect = 7e-49
 Identities = 104/185 (56%), Positives = 129/185 (69%)
 Frame = -3

Query: 786 ALLSYFIQPVYISSMIVGKYLRQSAAVPLESHLRRAVTERILPLANKLMSPFRVNKPQIL 607
           ALLSYF+QPVY+SS+ VG  L       LE  L+RA+ ER+LPL+N+L SPF VN+P   
Sbjct: 221 ALLSYFLQPVYLSSITVGLPLDILENFRLEDSLKRALYERMLPLSNELTSPFLVNQPIFH 280

Query: 606 EAPMPPEEFQQSESASLTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGAMYPSSESSX 427
            AP+PP++FQQSESA+ TLTCGYSICWN+ GLH+VI+GTTGRKQGTSAKGA+YPS++SS 
Sbjct: 281 AAPVPPKDFQQSESAANTLTCGYSICWNECGLHDVIMGTTGRKQGTSAKGALYPSTQSSL 340

Query: 426 XXXXXXXXXXXXRHKCPTESQDDEISYQRLKAGAQEYRLISSIFKESSPFCNWLLKPLDL 247
                         +    S  + I+Y+ LK GA+EY L S IFK  + F  W LKPLD 
Sbjct: 341 CKKRLLEVFLSLGPENLIGSLPNGITYRELKDGAEEYHLASKIFKRKASFNKWFLKPLDC 400

Query: 246 EAFSI 232
           EAF I
Sbjct: 401 EAFPI 405


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