BLASTX nr result

ID: Coptis23_contig00027877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027877
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN71834.1| chloroplast iron superoxide dismutase variant 3 [...   168   4e-40
gb|AEN71833.1| chloroplast iron superoxide dismutase variant 2 [...   168   4e-40
gb|AEN71832.1| chloroplast iron superoxide dismutase variant 1 [...   168   4e-40
gb|ADK70232.2| chloroplast iron superoxide dismutase [Dimocarpus...   168   4e-40
gb|ADK70231.1| chloroplast iron superoxide dismutase, partial [D...   168   4e-40

>gb|AEN71834.1| chloroplast iron superoxide dismutase variant 3 [Dimocarpus longan]
          Length = 242

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/101 (76%), Positives = 85/101 (84%)
 Frame = -1

Query: 305 KLSSPPRPKLVAFYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXL 126
           K  +PPR K+VA+YGL TPPYKLDALEPYMS++TLE+HWGEHHR YV+G          L
Sbjct: 25  KRQTPPR-KVVAYYGLKTPPYKLDALEPYMSKRTLEMHWGEHHRGYVDGLNKQLEKSDLL 83

Query: 125 YGCTMDELVRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 3
           YG TMDELV+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPG
Sbjct: 84  YGYTMDELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 124


>gb|AEN71833.1| chloroplast iron superoxide dismutase variant 2 [Dimocarpus longan]
          Length = 212

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/101 (76%), Positives = 85/101 (84%)
 Frame = -1

Query: 305 KLSSPPRPKLVAFYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXL 126
           K  +PPR K+VA+YGL TPPYKLDALEPYMS++TLE+HWGEHHR YV+G          L
Sbjct: 25  KRQTPPR-KVVAYYGLKTPPYKLDALEPYMSKRTLEMHWGEHHRGYVDGLNKQLEKSDLL 83

Query: 125 YGCTMDELVRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 3
           YG TMDELV+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPG
Sbjct: 84  YGYTMDELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 124


>gb|AEN71832.1| chloroplast iron superoxide dismutase variant 1 [Dimocarpus longan]
          Length = 215

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/101 (76%), Positives = 85/101 (84%)
 Frame = -1

Query: 305 KLSSPPRPKLVAFYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXL 126
           K  +PPR K+VA+YGL TPPYKLDALEPYMS++TLE+HWGEHHR YV+G          L
Sbjct: 25  KRQTPPR-KVVAYYGLKTPPYKLDALEPYMSKRTLEMHWGEHHRGYVDGLNKQLEKSDLL 83

Query: 125 YGCTMDELVRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 3
           YG TMDELV+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPG
Sbjct: 84  YGYTMDELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 124


>gb|ADK70232.2| chloroplast iron superoxide dismutase [Dimocarpus longan]
           gi|345018992|gb|ADK70233.2| chloroplast iron superoxide
           dismutase [Dimocarpus longan]
           gi|345018994|gb|ADK70234.2| chloroplast iron superoxide
           dismutase [Dimocarpus longan]
           gi|345018998|gb|ADK70236.2| chloroplast iron superoxide
           dismutase [Dimocarpus longan]
          Length = 250

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/101 (76%), Positives = 85/101 (84%)
 Frame = -1

Query: 305 KLSSPPRPKLVAFYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXL 126
           K  +PPR K+VA+YGL TPPYKLDALEPYMS++TLE+HWGEHHR YV+G          L
Sbjct: 25  KRQTPPR-KVVAYYGLKTPPYKLDALEPYMSKRTLEMHWGEHHRGYVDGLNKQLEKSDLL 83

Query: 125 YGCTMDELVRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 3
           YG TMDELV+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPG
Sbjct: 84  YGYTMDELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 124


>gb|ADK70231.1| chloroplast iron superoxide dismutase, partial [Dimocarpus longan]
          Length = 250

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/101 (76%), Positives = 85/101 (84%)
 Frame = -1

Query: 305 KLSSPPRPKLVAFYGLTTPPYKLDALEPYMSRKTLELHWGEHHRNYVEGXXXXXXXXXXL 126
           K  +PPR K+VA+YGL TPPYKLDALEPYMS++TLE+HWGEHHR YV+G          L
Sbjct: 25  KRQTPPR-KVVAYYGLKTPPYKLDALEPYMSKRTLEMHWGEHHRGYVDGLNKQLEKSDLL 83

Query: 125 YGCTMDELVRVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 3
           YG TMDELV+VTYNNGNPLPEFNNAAQVWNHDFFWESMQPG
Sbjct: 84  YGYTMDELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 124


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