BLASTX nr result

ID: Coptis23_contig00027871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027871
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315141.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
gb|AFK40013.1| unknown [Lotus japonicus]                               83   2e-14
emb|CBI25434.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation...    83   2e-14
ref|NP_973648.1| Eukaryotic translation initiation factor 2 subu...    82   3e-14

>ref|XP_002315141.1| predicted protein [Populus trichocarpa] gi|222864181|gb|EEF01312.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
 Frame = +1

Query: 1   LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180
           LYRKYGHAFEAF+++VND DS+LDPL TRE+ +E GPDGQEVTKV  AV  ++K AL+ N
Sbjct: 138 LYRKYGHAFEAFKIMVNDPDSVLDPL-TREV-KETGPDGQEVTKVVPAVSEEIKEALIRN 195

Query: 181 IRASMT-----LEADLE 216
           IR  MT     + AD+E
Sbjct: 196 IRRRMTPQPLKIRADIE 212


>gb|AFK40013.1| unknown [Lotus japonicus]
          Length = 340

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
 Frame = +1

Query: 1   LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180
           LYRKYGHAFEAF+++V D DS+L+ L+TRE+ +E+GPDGQEVTKV  AV  +VK +L+ N
Sbjct: 135 LYRKYGHAFEAFKIVVTDPDSVLN-LLTREV-KEVGPDGQEVTKVVPAVSEEVKDSLVKN 192

Query: 181 IRASMT-----LEADLE 216
           IR  MT     + AD+E
Sbjct: 193 IRRRMTPQPLKIRADIE 209


>emb|CBI25434.3| unnamed protein product [Vitis vinifera]
          Length = 229

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
 Frame = +1

Query: 1   LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180
           LYRKYGHAFEAF++IV D DS+L+ L TRE+ +E+GPDGQEVTKV  A+  +VK AL+ N
Sbjct: 23  LYRKYGHAFEAFKIIVTDPDSVLNSL-TREV-KEVGPDGQEVTKVVPAISEEVKDALVKN 80

Query: 181 IRASMT-----LEADLE 216
           IR  MT     + AD+E
Sbjct: 81  IRRRMTPQPLKIRADIE 97


>ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
           [Vitis vinifera]
          Length = 344

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
 Frame = +1

Query: 1   LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180
           LYRKYGHAFEAF++IV D DS+L+ L TRE+ +E+GPDGQEVTKV  A+  +VK AL+ N
Sbjct: 138 LYRKYGHAFEAFKIIVTDPDSVLNSL-TREV-KEVGPDGQEVTKVVPAISEEVKDALVKN 195

Query: 181 IRASMT-----LEADLE 216
           IR  MT     + AD+E
Sbjct: 196 IRRRMTPQPLKIRADIE 212


>ref|NP_973648.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|79324819|ref|NP_001031518.1| Eukaryotic
           translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|124300956|gb|ABN04730.1| At2g40290
           [Arabidopsis thaliana] gi|330254714|gb|AEC09808.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana] gi|330254715|gb|AEC09809.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana]
          Length = 241

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
 Frame = +1

Query: 1   LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180
           LYR++GHAFEAF+++V D DS+L PL TREI+E +GPDGQEVTKV  AV  +VK AL+ N
Sbjct: 138 LYRRHGHAFEAFKILVTDPDSVLGPL-TREIKE-VGPDGQEVTKVVPAVTEEVKDALVKN 195

Query: 181 IRASMT-----LEADLE 216
           IR  MT     + AD+E
Sbjct: 196 IRRRMTPQPMKIRADIE 212


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