BLASTX nr result
ID: Coptis23_contig00027871
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00027871 (377 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315141.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16 gb|AFK40013.1| unknown [Lotus japonicus] 83 2e-14 emb|CBI25434.3| unnamed protein product [Vitis vinifera] 83 2e-14 ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation... 83 2e-14 ref|NP_973648.1| Eukaryotic translation initiation factor 2 subu... 82 3e-14 >ref|XP_002315141.1| predicted protein [Populus trichocarpa] gi|222864181|gb|EEF01312.1| predicted protein [Populus trichocarpa] Length = 343 Score = 88.6 bits (218), Expect = 5e-16 Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 5/77 (6%) Frame = +1 Query: 1 LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180 LYRKYGHAFEAF+++VND DS+LDPL TRE+ +E GPDGQEVTKV AV ++K AL+ N Sbjct: 138 LYRKYGHAFEAFKIMVNDPDSVLDPL-TREV-KETGPDGQEVTKVVPAVSEEIKEALIRN 195 Query: 181 IRASMT-----LEADLE 216 IR MT + AD+E Sbjct: 196 IRRRMTPQPLKIRADIE 212 >gb|AFK40013.1| unknown [Lotus japonicus] Length = 340 Score = 83.2 bits (204), Expect = 2e-14 Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 5/77 (6%) Frame = +1 Query: 1 LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180 LYRKYGHAFEAF+++V D DS+L+ L+TRE+ +E+GPDGQEVTKV AV +VK +L+ N Sbjct: 135 LYRKYGHAFEAFKIVVTDPDSVLN-LLTREV-KEVGPDGQEVTKVVPAVSEEVKDSLVKN 192 Query: 181 IRASMT-----LEADLE 216 IR MT + AD+E Sbjct: 193 IRRRMTPQPLKIRADIE 209 >emb|CBI25434.3| unnamed protein product [Vitis vinifera] Length = 229 Score = 83.2 bits (204), Expect = 2e-14 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 5/77 (6%) Frame = +1 Query: 1 LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180 LYRKYGHAFEAF++IV D DS+L+ L TRE+ +E+GPDGQEVTKV A+ +VK AL+ N Sbjct: 23 LYRKYGHAFEAFKIIVTDPDSVLNSL-TREV-KEVGPDGQEVTKVVPAISEEVKDALVKN 80 Query: 181 IRASMT-----LEADLE 216 IR MT + AD+E Sbjct: 81 IRRRMTPQPLKIRADIE 97 >ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha [Vitis vinifera] Length = 344 Score = 83.2 bits (204), Expect = 2e-14 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 5/77 (6%) Frame = +1 Query: 1 LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180 LYRKYGHAFEAF++IV D DS+L+ L TRE+ +E+GPDGQEVTKV A+ +VK AL+ N Sbjct: 138 LYRKYGHAFEAFKIIVTDPDSVLNSL-TREV-KEVGPDGQEVTKVVPAISEEVKDALVKN 195 Query: 181 IRASMT-----LEADLE 216 IR MT + AD+E Sbjct: 196 IRRRMTPQPLKIRADIE 212 >ref|NP_973648.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana] gi|79324819|ref|NP_001031518.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana] gi|124300956|gb|ABN04730.1| At2g40290 [Arabidopsis thaliana] gi|330254714|gb|AEC09808.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana] gi|330254715|gb|AEC09809.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana] Length = 241 Score = 82.4 bits (202), Expect = 3e-14 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 5/77 (6%) Frame = +1 Query: 1 LYRKYGHAFEAFRLIVNDADSILDPLITREIEEEIGPDGQEVTKVHTAVPVDVKAALLTN 180 LYR++GHAFEAF+++V D DS+L PL TREI+E +GPDGQEVTKV AV +VK AL+ N Sbjct: 138 LYRRHGHAFEAFKILVTDPDSVLGPL-TREIKE-VGPDGQEVTKVVPAVTEEVKDALVKN 195 Query: 181 IRASMT-----LEADLE 216 IR MT + AD+E Sbjct: 196 IRRRMTPQPMKIRADIE 212