BLASTX nr result

ID: Coptis23_contig00027870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027870
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273660.1| PREDICTED: trigger factor-like [Vitis vinifera]   184   1e-44
emb|CBI24665.3| unnamed protein product [Vitis vinifera]              181   8e-44
ref|XP_002530570.1| conserved hypothetical protein [Ricinus comm...   179   3e-43
gb|AEC10971.1| hypothetical protein [Camellia sinensis]               176   3e-42
ref|XP_004140596.1| PREDICTED: trigger factor-like [Cucumis sati...   172   4e-41

>ref|XP_002273660.1| PREDICTED: trigger factor-like [Vitis vinifera]
          Length = 212

 Score =  184 bits (467), Expect = 1e-44
 Identities = 94/154 (61%), Positives = 121/154 (78%), Gaps = 5/154 (3%)
 Frame = +2

Query: 2   NYRALISTC--VVTSASGLKQVGTNAAPMEDISVVLSTTESGK---IKVNVSGAKSEAIF 166
           +YRA+   C  V   +SG+K  G +++  ED SV  ++T + K   I V +SG K+  IF
Sbjct: 52  SYRAIHKYCPAVCAVSSGVKDPGVSSSQFEDFSVTATSTGNAKELKISVELSGVKTRTIF 111

Query: 167 EDVFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKEIISSAVAEYVE 346
           ++VFSKMVA AQPIPGFRRVKGGKTP+IPR++LLE+LGPSKVY QVIK++I+S VAEYVE
Sbjct: 112 DNVFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTVAEYVE 171

Query: 347 KEKLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 448
           KE + V+KDLRVEQSFE+LE ++EPGEEF FDA+
Sbjct: 172 KEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAV 205


>emb|CBI24665.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  181 bits (459), Expect = 8e-44
 Identities = 93/152 (61%), Positives = 119/152 (78%), Gaps = 5/152 (3%)
 Frame = +2

Query: 8   RALISTC--VVTSASGLKQVGTNAAPMEDISVVLSTTESGK---IKVNVSGAKSEAIFED 172
           RA+   C  V   +SG+K  G +++  ED SV  ++T + K   I V +SG K+  IF++
Sbjct: 48  RAIHKYCPAVCAVSSGVKDPGVSSSQFEDFSVTATSTGNAKELKISVELSGVKTRTIFDN 107

Query: 173 VFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKEIISSAVAEYVEKE 352
           VFSKMVA AQPIPGFRRVKGGKTP+IPR++LLE+LGPSKVY QVIK++I+S VAEYVEKE
Sbjct: 108 VFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTVAEYVEKE 167

Query: 353 KLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 448
            + V+KDLRVEQSFE+LE ++EPGEEF FDA+
Sbjct: 168 GIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAV 199


>ref|XP_002530570.1| conserved hypothetical protein [Ricinus communis]
           gi|223529869|gb|EEF31800.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score =  179 bits (454), Expect = 3e-43
 Identities = 91/152 (59%), Positives = 117/152 (76%), Gaps = 3/152 (1%)
 Frame = +2

Query: 2   NYRALISTCVVTSASGLKQVGTNAAPMEDISVVLSTTESGK---IKVNVSGAKSEAIFED 172
           N+R L   C V S      VG +++  E  SV+ S+T   +   I V VSG K+ AIF++
Sbjct: 29  NHRCLTPVCAVLSDMQDIGVGASSSQFEQFSVMASSTNEPRELRISVEVSGVKTRAIFDN 88

Query: 173 VFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKEIISSAVAEYVEKE 352
           VF KMVAAAQPIPGFRRVKGGKTP+IPR++LLE+LGPSKVYK+VIK++I+S VA+YVEKE
Sbjct: 89  VFEKMVAAAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYKEVIKKVINSTVAKYVEKE 148

Query: 353 KLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 448
            L V+KDLR+EQSFE+LE ++EP  +FSFDA+
Sbjct: 149 GLKVSKDLRIEQSFEDLEETFEPDAKFSFDAV 180


>gb|AEC10971.1| hypothetical protein [Camellia sinensis]
          Length = 209

 Score =  176 bits (446), Expect = 3e-42
 Identities = 89/148 (60%), Positives = 116/148 (78%), Gaps = 3/148 (2%)
 Frame = +2

Query: 14  LISTCVVTSASGLKQVGTNAAPMEDISVVLSTTESG---KIKVNVSGAKSEAIFEDVFSK 184
           L++ C V+S  G++     ++  +D SV  S T      KI V VSG K+++IF+DVFSK
Sbjct: 57  LLAVCAVSS--GVEDNEVLSSQFQDFSVAASGTSKASELKISVEVSGTKTQSIFDDVFSK 114

Query: 185 MVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKEIISSAVAEYVEKEKLNV 364
           MVA AQPIPGFRR+KGGKTP+IP E+LL++LGPSKVYKQVI ++I+S +AEYVEKE L V
Sbjct: 115 MVADAQPIPGFRRLKGGKTPDIPTEILLQVLGPSKVYKQVITKVINSTIAEYVEKEGLTV 174

Query: 365 TKDLRVEQSFEELEASYEPGEEFSFDAI 448
           +KDLRVEQSFE+LEA +EPG++FSFD +
Sbjct: 175 SKDLRVEQSFEDLEAMFEPGDQFSFDVV 202


>ref|XP_004140596.1| PREDICTED: trigger factor-like [Cucumis sativus]
           gi|449487315|ref|XP_004157566.1| PREDICTED: trigger
           factor-like [Cucumis sativus]
          Length = 208

 Score =  172 bits (436), Expect = 4e-41
 Identities = 95/153 (62%), Positives = 114/153 (74%), Gaps = 4/153 (2%)
 Frame = +2

Query: 2   NYRALISTCVVTSASGLKQVGTNAAPMEDISV--VLSTTESG--KIKVNVSGAKSEAIFE 169
           N R L + C V S    + V  +++  ED SV  V +T E+   KI+V VSGAK+ AIF 
Sbjct: 53  NNRYLPAACAVLS----ENVSVSSSQFEDFSVTNVTNTKENKELKIRVEVSGAKTRAIFN 108

Query: 170 DVFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKEIISSAVAEYVEK 349
            VF +MVA AQPIPGFRRVKGGKTPNIPR++LLEILGPSKVYKQVIKE+I+S VA YVEK
Sbjct: 109 VVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK 168

Query: 350 EKLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 448
           E L V KDLR++QS+E+LE  +EP E F FDAI
Sbjct: 169 EALKVGKDLRIDQSYEDLEDQFEPDENFFFDAI 201


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