BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027867
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Rici...   325   1e-86
ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002263471.1| PREDICTED: NEP1-interacting protein 1 [Vitis...   318   1e-84
gb|AFK36061.1| unknown [Lotus japonicus]                              317   5e-84
ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago trunc...   315   2e-83

>ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
            gi|223529804|gb|EEF31739.1| RING-H2 finger protein ATL4M,
            putative [Ricinus communis]
          Length = 235

 Score =  325 bits (833), Expect = 1e-86
 Identities = 160/235 (68%), Positives = 188/235 (80%)
 Frame = -2

Query: 1068 MEYFSYHXXXXXXXXXSFGCWVDKVRHIFXXXXXXXXXXXXSAILTFSFAVVGTTLGAMT 889
            ME++ Y           FG +V+K++ +             SAI TF FA+VGT LGAMT
Sbjct: 1    MEFYPYPSRFSMSSLPFFGDFVEKIKEVCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMT 60

Query: 888  GALIGQETESGFFRGAAVGAISGAVFSIEVFEYSLLLWNSDETGVGCLLYLVDVIASLLS 709
            GALIGQETESGF RGAAVGAISGAVFSIEVFE SLLLW SDE+G+GCLLYL+DVIASLLS
Sbjct: 61   GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLS 120

Query: 708  GRLVRERIGPAMLNAVQSQMGAIETSFEDSPDIFAIGGAKGLSKEIVERIPKIKVTTKNN 529
            GRLVRERIGPAML+AVQSQMGA+ETSFE+  +IF  GGAKGL+ + VE+IPKIK+T+ N 
Sbjct: 121  GRLVRERIGPAMLSAVQSQMGAVETSFEEVQNIFDTGGAKGLTGDTVEKIPKIKITSNNT 180

Query: 528  VDASGDKISCSVCLQDFQLEEKVRILPFCHHMFHLPCIDKWLMKQGSCPLCRRDM 364
            +DASG+K++CSVCLQDFQ+ E VR LP CHHMFHLPCIDKWL++  SCPLCRRD+
Sbjct: 181  IDASGEKVACSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLLRHASCPLCRRDL 235


>ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|222836721|gb|EEE75114.1|
            predicted protein [Populus trichocarpa]
          Length = 224

 Score =  321 bits (823), Expect = 2e-85
 Identities = 157/218 (72%), Positives = 183/218 (83%)
 Frame = -2

Query: 1017 FGCWVDKVRHIFXXXXXXXXXXXXSAILTFSFAVVGTTLGAMTGALIGQETESGFFRGAA 838
            FG +VDKV+ +             SAI TF FA+VGT LGAMTGALIGQETESGF RGAA
Sbjct: 7    FGNFVDKVKEVCNFVVSAIIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAA 66

Query: 837  VGAISGAVFSIEVFEYSLLLWNSDETGVGCLLYLVDVIASLLSGRLVRERIGPAMLNAVQ 658
            VGAISGAVFSIEVFE SL+LW SDE+G+GC+LYL+DVIASLLSGRLVRERIGPAML+AVQ
Sbjct: 67   VGAISGAVFSIEVFESSLVLWQSDESGIGCVLYLIDVIASLLSGRLVRERIGPAMLSAVQ 126

Query: 657  SQMGAIETSFEDSPDIFAIGGAKGLSKEIVERIPKIKVTTKNNVDASGDKISCSVCLQDF 478
            SQMGA+ET+FE+ P+IF  GG+KGL  + +E+IPKI++T+ NNVD SG+K+SCSVCLQDF
Sbjct: 127  SQMGAVETNFEEIPNIFDTGGSKGLPGDSLEKIPKIRITSNNNVDESGEKVSCSVCLQDF 186

Query: 477  QLEEKVRILPFCHHMFHLPCIDKWLMKQGSCPLCRRDM 364
            QL E VR LP CHHMFHLPCIDKWL++  SCPLCRRD+
Sbjct: 187  QLGETVRSLPHCHHMFHLPCIDKWLLRHASCPLCRRDL 224


>ref|XP_002263471.1| PREDICTED: NEP1-interacting protein 1 [Vitis vinifera]
            gi|296084057|emb|CBI24445.3| unnamed protein product
            [Vitis vinifera]
          Length = 235

 Score =  318 bits (816), Expect = 1e-84
 Identities = 161/235 (68%), Positives = 184/235 (78%)
 Frame = -2

Query: 1068 MEYFSYHXXXXXXXXXSFGCWVDKVRHIFXXXXXXXXXXXXSAILTFSFAVVGTTLGAMT 889
            ME+++Y          SF   V +VR  F            SAI TF FA+VGT LGAMT
Sbjct: 1    MEFYAYPSHSYSWPSFSFANLVGRVRDFFSFAFSAILGNVFSAIFTFFFALVGTMLGAMT 60

Query: 888  GALIGQETESGFFRGAAVGAISGAVFSIEVFEYSLLLWNSDETGVGCLLYLVDVIASLLS 709
            GALIGQETESGF RGAAVGAISGAVFSIEVFE SL+LW SDE+G+GCLLYL+DVI SLLS
Sbjct: 61   GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIVSLLS 120

Query: 708  GRLVRERIGPAMLNAVQSQMGAIETSFEDSPDIFAIGGAKGLSKEIVERIPKIKVTTKNN 529
            GRLVRERIGPAML+AVQSQMGA+E S+++ P+IF  GGAKGL  + VE+IPKI +T+ NN
Sbjct: 121  GRLVRERIGPAMLSAVQSQMGAVEVSYDEVPNIFDTGGAKGLPGDSVEKIPKITITSDNN 180

Query: 528  VDASGDKISCSVCLQDFQLEEKVRILPFCHHMFHLPCIDKWLMKQGSCPLCRRDM 364
             DASG+K+SCSVCLQDFQL E VR LP CHHMFHLPCIDKWL+  GSCPLCRRD+
Sbjct: 181  GDASGEKVSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDKWLLGHGSCPLCRRDL 235


>gb|AFK36061.1| unknown [Lotus japonicus]
          Length = 237

 Score =  317 bits (811), Expect = 5e-84
 Identities = 160/220 (72%), Positives = 180/220 (81%), Gaps = 2/220 (0%)
 Frame = -2

Query: 1017 FGCWVDKVRHIFXXXXXXXXXXXXSAILTFSFAVVGTTLGAMTGALIGQETESGFFRGAA 838
            FG  VDKV+ I             SAILTF FA+VGT LG MTGALIGQETESGF RGAA
Sbjct: 18   FGNLVDKVKQICNLAISAIIGNILSAILTFCFALVGTLLGVMTGALIGQETESGFIRGAA 77

Query: 837  VGAISGAVFSIEVFEYSLLLWNSDETGVGCLLYLVDVIASLLSGRLVRERIGPAMLNAVQ 658
            VGAIS AVFSIEVFE SL+LW+SDE+G+GCLLYL+DVI SLLSGRLVRERIGPAML+AVQ
Sbjct: 78   VGAISRAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIGSLLSGRLVRERIGPAMLSAVQ 137

Query: 657  SQMGAIETSFEDSPDIF--AIGGAKGLSKEIVERIPKIKVTTKNNVDASGDKISCSVCLQ 484
            SQMGA+ET F++  +IF    GGAKGLS + VE+IPKIK+TT NN DASG+++SCSVCLQ
Sbjct: 138  SQMGAVETGFDEVQNIFDTGCGGAKGLSGDSVEKIPKIKITTDNNADASGERVSCSVCLQ 197

Query: 483  DFQLEEKVRILPFCHHMFHLPCIDKWLMKQGSCPLCRRDM 364
            DFQL E VR LP CHHMFHLPCIDKWL + GSCPLCRRD+
Sbjct: 198  DFQLGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL 237


>ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago truncatula]
            gi|355513581|gb|AES95204.1| RING-H2 finger protein ATL4M
            [Medicago truncatula] gi|388507050|gb|AFK41591.1| unknown
            [Medicago truncatula]
          Length = 234

 Score =  315 bits (807), Expect = 2e-83
 Identities = 157/218 (72%), Positives = 183/218 (83%)
 Frame = -2

Query: 1017 FGCWVDKVRHIFXXXXXXXXXXXXSAILTFSFAVVGTTLGAMTGALIGQETESGFFRGAA 838
            FG +VDKV+               SAILTF FA+VGT LGA+TGALIGQETESGF RGAA
Sbjct: 18   FGNFVDKVKQFGTLAISVIIGNIFSAILTFCFALVGTLLGALTGALIGQETESGFIRGAA 77

Query: 837  VGAISGAVFSIEVFEYSLLLWNSDETGVGCLLYLVDVIASLLSGRLVRERIGPAMLNAVQ 658
            VGAISGAVFSIEVFE SL+LW+SDE+G+GCLLYL+DVI SLLSGRLVRERIGPAML+AVQ
Sbjct: 78   VGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIVSLLSGRLVRERIGPAMLSAVQ 137

Query: 657  SQMGAIETSFEDSPDIFAIGGAKGLSKEIVERIPKIKVTTKNNVDASGDKISCSVCLQDF 478
            SQMGA+ETSF++  +IF IGG+KGLS + V +IPKIK+T  +N++ASG+K+SCSVCLQDF
Sbjct: 138  SQMGAVETSFDEVQNIFDIGGSKGLSVDSVSKIPKIKITA-DNIEASGEKVSCSVCLQDF 196

Query: 477  QLEEKVRILPFCHHMFHLPCIDKWLMKQGSCPLCRRDM 364
            QL E VR LP CHHMFHLPCID WL++ GSCPLCRRD+
Sbjct: 197  QLGETVRSLPHCHHMFHLPCIDMWLLRHGSCPLCRRDL 234