BLASTX nr result

ID: Coptis23_contig00027846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027846
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37547.3| unnamed protein product [Vitis vinifera]              327   2e-87
ref|XP_004163048.1| PREDICTED: DUF246 domain-containing protein ...   295   8e-78
ref|XP_004148653.1| PREDICTED: DUF246 domain-containing protein ...   292   4e-77
ref|XP_003526859.1| PREDICTED: DUF246 domain-containing protein ...   290   3e-76
ref|XP_003522491.1| PREDICTED: DUF246 domain-containing protein ...   287   1e-75

>emb|CBI37547.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score =  327 bits (838), Expect = 2e-87
 Identities = 167/243 (68%), Positives = 195/243 (80%), Gaps = 1/243 (0%)
 Frame = -1

Query: 727 MVNSGSRSFPHPRNSTRSNNKLYLIIMKPTLFSITVYISLLFGFSIFVFIFSTRQILEND 548
           MVNS  R + H R S+ S      +  KPTL++ITVYI LLF FSI +F+F TR +LE++
Sbjct: 1   MVNS--RGYSHSRASSTSK----FLPRKPTLYTITVYIILLFAFSIVIFLFYTRDVLEDE 54

Query: 547 PKLFLSNDSQSLQMFDKQLWGAVN-FGFHPCVKPTSRYKEAQESNRYITVRCNGGLNQMR 371
            K   S DSQ +QM D +LW A +  G HPCVKPTS+YK  Q  +RY+TV+ NGGLNQMR
Sbjct: 55  QKPLSSEDSQFVQMQD-ELWNAPSSHGLHPCVKPTSKYKATQGWDRYMTVKSNGGLNQMR 113

Query: 370 TGISDMVAVARIMNATLVVPQLDKKSFWKDSSTFSDIFDEHHFITTLQGDVKIVNELPKG 191
           TGISDMVAVARIMNATLV+PQLD++SFWKDSSTF+DIFDE HF+TTLQGDV+IV ELP+ 
Sbjct: 114 TGISDMVAVARIMNATLVIPQLDRRSFWKDSSTFADIFDELHFMTTLQGDVRIVKELPRQ 173

Query: 190 LASAPRARKHFTSWSDQNYYKEMEQLWKDYQVIHVAKSDSRLANNDLPLDIQRLRCRALY 11
           L S PRARKHFTSWS   YY+EM  LW++YQVIHVAKSDSRLANNDLP+DIQRLRCRALY
Sbjct: 174 LESVPRARKHFTSWSSMGYYQEMTHLWEEYQVIHVAKSDSRLANNDLPIDIQRLRCRALY 233

Query: 10  HAL 2
           HAL
Sbjct: 234 HAL 236


>ref|XP_004163048.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 505

 Score =  295 bits (754), Expect = 8e-78
 Identities = 152/242 (62%), Positives = 182/242 (75%), Gaps = 5/242 (2%)
 Frame = -1

Query: 712 SRSFPHPRNSTRSNNKLYLIIMKPTLFSITVYISLLFGFSIFVFIFSTRQILENDPKLFL 533
           +RSF   R    S    ++I    + F++T+++ L+F  SIFVF+F TR IL+++ K   
Sbjct: 3   NRSFVQHRIPPTSR---FIIRKSSSPFAVTLFLILIFASSIFVFLFCTRNILDDEQKPLF 59

Query: 532 SN----DSQSLQMFDKQLWGAVN-FGFHPCVKPTSRYKEAQESNRYITVRCNGGLNQMRT 368
           S      S+S       LW A + +GFHPCVKPTSRY+ AQ S+ YITVR NGGLNQMR 
Sbjct: 60  SKPEKFQSKSELKSVDHLWNAPSSYGFHPCVKPTSRYEAAQTSDHYITVRSNGGLNQMRA 119

Query: 367 GISDMVAVARIMNATLVVPQLDKKSFWKDSSTFSDIFDEHHFITTLQGDVKIVNELPKGL 188
           GISDMVAVARI+N TLV+PQLDK+SFW D+STFSDIF+EHHFI TLQ DVKIV ELPK L
Sbjct: 120 GISDMVAVARILNGTLVIPQLDKRSFWHDTSTFSDIFNEHHFIKTLQSDVKIVKELPKEL 179

Query: 187 ASAPRARKHFTSWSDQNYYKEMEQLWKDYQVIHVAKSDSRLANNDLPLDIQRLRCRALYH 8
            S P ARKHFTSW+   YY+E+ +LW+DYQVIHVAKSDSRLANNDLPLDIQRLRCRA+Y 
Sbjct: 180 ESIPHARKHFTSWAGFGYYEEIARLWRDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYE 239

Query: 7   AL 2
           AL
Sbjct: 240 AL 241


>ref|XP_004148653.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 505

 Score =  292 bits (748), Expect = 4e-77
 Identities = 151/242 (62%), Positives = 181/242 (74%), Gaps = 5/242 (2%)
 Frame = -1

Query: 712 SRSFPHPRNSTRSNNKLYLIIMKPTLFSITVYISLLFGFSIFVFIFSTRQILENDPKLFL 533
           +RSF   R    S    ++I    + F++T+++ L+F  SIFVF+F TR IL+++ K   
Sbjct: 3   NRSFVQHRIPPTSR---FIIRKSSSPFAVTLFLILIFASSIFVFLFCTRNILDDEQKPLF 59

Query: 532 SN----DSQSLQMFDKQLWGAVN-FGFHPCVKPTSRYKEAQESNRYITVRCNGGLNQMRT 368
           S      S+S       LW A + +GFHPCVKPTSRY+ AQ S+ YITVR NGGLNQMR 
Sbjct: 60  SKPEKFQSKSELKSVDHLWNAPSSYGFHPCVKPTSRYEAAQTSDHYITVRSNGGLNQMRA 119

Query: 367 GISDMVAVARIMNATLVVPQLDKKSFWKDSSTFSDIFDEHHFITTLQGDVKIVNELPKGL 188
           GISDMVAVARI+N TLV+PQLDK+SFW D+STF DIF+EHHFI TLQ DVKIV ELPK L
Sbjct: 120 GISDMVAVARILNGTLVIPQLDKRSFWHDTSTFLDIFNEHHFIKTLQSDVKIVKELPKEL 179

Query: 187 ASAPRARKHFTSWSDQNYYKEMEQLWKDYQVIHVAKSDSRLANNDLPLDIQRLRCRALYH 8
            S P ARKHFTSW+   YY+E+ +LW+DYQVIHVAKSDSRLANNDLPLDIQRLRCRA+Y 
Sbjct: 180 ESIPHARKHFTSWAGFGYYEEIARLWRDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYE 239

Query: 7   AL 2
           AL
Sbjct: 240 AL 241


>ref|XP_003526859.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 510

 Score =  290 bits (741), Expect = 3e-76
 Identities = 154/250 (61%), Positives = 184/250 (73%), Gaps = 8/250 (3%)
 Frame = -1

Query: 727 MVNSGSRSFPHPRNSTRSNNKLYLIIMKPTLFSITVYISLLFGFSIFVFIFSTRQI-LEN 551
           MV+ GS S     +S+    + +   + P++  IT Y   +F FSIF+F F  R I ++ 
Sbjct: 1   MVSRGSYS-----SSSLLTGRFHARKLSPSI--ITFYTMFIFAFSIFMFFFYVRHISVDE 53

Query: 550 DPKL-FLSNDSQSLQMFD-----KQLWGA-VNFGFHPCVKPTSRYKEAQESNRYITVRCN 392
           DP L  LS  S+S Q+ +     KQLW    N G H CVKPT++YK AQ  +RY+TVR N
Sbjct: 54  DPPLPLLSQQSKSHQVPELPVHYKQLWDTPFNHGLHQCVKPTTKYKAAQGFDRYLTVRSN 113

Query: 391 GGLNQMRTGISDMVAVARIMNATLVVPQLDKKSFWKDSSTFSDIFDEHHFITTLQGDVKI 212
           GGLNQMRTGISDMVAVA IMNATLV+PQLDK+SFW DSS FSD+FDE HFI +L+GD++I
Sbjct: 114 GGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWNDSSVFSDVFDELHFIESLKGDIRI 173

Query: 211 VNELPKGLASAPRARKHFTSWSDQNYYKEMEQLWKDYQVIHVAKSDSRLANNDLPLDIQR 32
           V+ELPK L   PRARKHFTSWS   YY+EM +LW DYQVIHVAKSDSRLANNDLPLDIQR
Sbjct: 174 VSELPKNLEGVPRARKHFTSWSGVGYYEEMTRLWSDYQVIHVAKSDSRLANNDLPLDIQR 233

Query: 31  LRCRALYHAL 2
           LRCRA+YHAL
Sbjct: 234 LRCRAMYHAL 243


>ref|XP_003522491.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 509

 Score =  287 bits (735), Expect = 1e-75
 Identities = 149/238 (62%), Positives = 180/238 (75%), Gaps = 8/238 (3%)
 Frame = -1

Query: 691 RNSTRSNNKLYLIIMKPTLFSITVYISLLFGFSIFVFIFSTRQIL--ENDPKLFLSNDSQ 518
           R+S+    + +   + P++  IT Y   +F FS+FV +F  R I   E+ P   LS  S+
Sbjct: 8   RSSSLLTGRFHARKLSPSI--ITFYTMFIFSFSVFV-LFYVRHISVDEDPPHPLLSQQSK 64

Query: 517 SLQMFD-----KQLWGAV-NFGFHPCVKPTSRYKEAQESNRYITVRCNGGLNQMRTGISD 356
           S Q+ +     KQLW  + N G H CVKPT++YK AQ  +RY+TVR NGGLNQMRTGISD
Sbjct: 65  SHQVPELPVHYKQLWDTLFNHGLHQCVKPTTKYKAAQGFDRYLTVRSNGGLNQMRTGISD 124

Query: 355 MVAVARIMNATLVVPQLDKKSFWKDSSTFSDIFDEHHFITTLQGDVKIVNELPKGLASAP 176
           MVAVA IMNATLV+PQLDK+SFWKDSS FSD+FDE HFI +L+GD++IV+ELPK L   P
Sbjct: 125 MVAVAHIMNATLVIPQLDKRSFWKDSSVFSDVFDEFHFIESLKGDIRIVSELPKNLEGVP 184

Query: 175 RARKHFTSWSDQNYYKEMEQLWKDYQVIHVAKSDSRLANNDLPLDIQRLRCRALYHAL 2
           RARKHFTSWS  +YY+EM +LW DYQVIHVAKSDSRLANNDLPLDIQRLRCRA+YHAL
Sbjct: 185 RARKHFTSWSGVSYYEEMTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYHAL 242


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