BLASTX nr result

ID: Coptis23_contig00027839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027839
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274758.1| PREDICTED: endochitinase PR4 [Vitis vinifera]     345   6e-93
ref|XP_002274537.1| PREDICTED: endochitinase PR4 [Vitis vinifera]     341   7e-92
emb|CAN79254.1| hypothetical protein VITISV_009137 [Vitis vinifera]   339   3e-91
gb|ACM45716.1| class IV chitinase [Pyrus pyrifolia]                   333   3e-89
ref|NP_191010.1| chitinase [Arabidopsis thaliana] gi|7288020|emb...   322   6e-86

>ref|XP_002274758.1| PREDICTED: endochitinase PR4 [Vitis vinifera]
          Length = 274

 Score =  345 bits (884), Expect = 6e-93
 Identities = 154/186 (82%), Positives = 170/186 (91%)
 Frame = +2

Query: 134 GQNCGCAPNLCCSRFGYCGTGPDYCGADCGEGPCNAPPSTNGVTVADIVTPEFFNGIINQ 313
           GQ+CGCA +LCCSR+GYCGTG DYCG  C EGPCN PPSTN V+VADIVT EFFNGII+Q
Sbjct: 29  GQDCGCAADLCCSRWGYCGTGDDYCGTGCQEGPCNPPPSTNNVSVADIVTQEFFNGIIDQ 88

Query: 314 ADAGCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEID 493
           ADA C GKNFYSR RFLEALNS+ QFGRVG+++DSKREIAAFFAHVTHETGHFCYIEEI+
Sbjct: 89  ADASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREIAAFFAHVTHETGHFCYIEEIN 148

Query: 494 GASKDYCDEANTQYPCVANKGYYGRGPIQLSWNFNYGPAGNSIGFDGLNAPETVATDPLV 673
           G+S+DYCDE NTQYPCVA KGYYGRGPIQLSWN+NYGPAG  IGFDGLN+PETVA+DP+V
Sbjct: 149 GSSRDYCDETNTQYPCVAGKGYYGRGPIQLSWNYNYGPAGEDIGFDGLNSPETVASDPVV 208

Query: 674 SFKTAL 691
           SFKTAL
Sbjct: 209 SFKTAL 214


>ref|XP_002274537.1| PREDICTED: endochitinase PR4 [Vitis vinifera]
          Length = 274

 Score =  341 bits (875), Expect = 7e-92
 Identities = 153/186 (82%), Positives = 169/186 (90%)
 Frame = +2

Query: 134 GQNCGCAPNLCCSRFGYCGTGPDYCGADCGEGPCNAPPSTNGVTVADIVTPEFFNGIINQ 313
           GQ+CGCA +LCCSR+GYCGTG DYCG  C EGPCN  PSTN V+VADIVT +FFNGII+Q
Sbjct: 29  GQDCGCAADLCCSRWGYCGTGDDYCGTGCQEGPCNPAPSTNNVSVADIVTQKFFNGIIDQ 88

Query: 314 ADAGCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEID 493
           ADA C GKNFYSR RFLEALNS+ QFGRVG+++DSKREIAAFFAHVTHETGHFCYIEEI+
Sbjct: 89  ADASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREIAAFFAHVTHETGHFCYIEEIN 148

Query: 494 GASKDYCDEANTQYPCVANKGYYGRGPIQLSWNFNYGPAGNSIGFDGLNAPETVATDPLV 673
           G+S+DYCDE NTQYPCVA KGYYGRGPIQLSWNFNYGPAG  IGFDGLN+PETVA+DP+V
Sbjct: 149 GSSRDYCDETNTQYPCVAGKGYYGRGPIQLSWNFNYGPAGEDIGFDGLNSPETVASDPVV 208

Query: 674 SFKTAL 691
           SFKTAL
Sbjct: 209 SFKTAL 214


>emb|CAN79254.1| hypothetical protein VITISV_009137 [Vitis vinifera]
          Length = 274

 Score =  339 bits (869), Expect = 3e-91
 Identities = 152/186 (81%), Positives = 168/186 (90%)
 Frame = +2

Query: 134 GQNCGCAPNLCCSRFGYCGTGPDYCGADCGEGPCNAPPSTNGVTVADIVTPEFFNGIINQ 313
           GQ+CGCA +LCCSR+GYCGTG DYCG  C EGPCN  PSTN V+VADIVT +FFNGII+Q
Sbjct: 29  GQDCGCAADLCCSRWGYCGTGDDYCGTGCQEGPCNPAPSTNNVSVADIVTQKFFNGIIDQ 88

Query: 314 ADAGCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEID 493
           ADA C GKNFYSR  FLEALNS+ QFGRVG+++DSKREIAAFFAHVTHETGHFCYIEEI+
Sbjct: 89  ADASCEGKNFYSRAXFLEALNSFSQFGRVGSEEDSKREIAAFFAHVTHETGHFCYIEEIN 148

Query: 494 GASKDYCDEANTQYPCVANKGYYGRGPIQLSWNFNYGPAGNSIGFDGLNAPETVATDPLV 673
           G+S+DYCDE NTQYPCVA KGYYGRGPIQLSWNFNYGPAG  IGFDGLN+PETVA+DP+V
Sbjct: 149 GSSRDYCDETNTQYPCVAGKGYYGRGPIQLSWNFNYGPAGEDIGFDGLNSPETVASDPVV 208

Query: 674 SFKTAL 691
           SFKTAL
Sbjct: 209 SFKTAL 214


>gb|ACM45716.1| class IV chitinase [Pyrus pyrifolia]
          Length = 272

 Score =  333 bits (853), Expect = 3e-89
 Identities = 153/188 (81%), Positives = 163/188 (86%), Gaps = 3/188 (1%)
 Frame = +2

Query: 137 QNCGCAPNLCCSRFGYCGTGPDYCGADCGEGPCNAP---PSTNGVTVADIVTPEFFNGII 307
           QNCGCA +LCCS++GYCGT   YCG  C  GPC  P   PSTN V VADIVTPEFFNGII
Sbjct: 25  QNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQTPSTNDVVVADIVTPEFFNGII 84

Query: 308 NQADAGCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEE 487
           +QADA CAGKNFYSR  FLEALNSY QFGR+G+ DDSKREIAAFFAHVTHETGHFCYIEE
Sbjct: 85  DQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKREIAAFFAHVTHETGHFCYIEE 144

Query: 488 IDGASKDYCDEANTQYPCVANKGYYGRGPIQLSWNFNYGPAGNSIGFDGLNAPETVATDP 667
           IDGASKDYCDE NTQYPC  NKGYYGRGPIQLSWNFNYGPAG SIGFDGLN+PETVA DP
Sbjct: 145 IDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYGPAGESIGFDGLNSPETVANDP 204

Query: 668 LVSFKTAL 691
           +++FKTAL
Sbjct: 205 VIAFKTAL 212


>ref|NP_191010.1| chitinase [Arabidopsis thaliana] gi|7288020|emb|CAB81807.1| class
           IV chitinase (CHIV) [Arabidopsis thaliana]
           gi|34146830|gb|AAQ62423.1| At3g54420 [Arabidopsis
           thaliana] gi|51971118|dbj|BAD44251.1| class IV chitinase
           (CHIV) [Arabidopsis thaliana]
           gi|332645707|gb|AEE79228.1| chitinase [Arabidopsis
           thaliana]
          Length = 273

 Score =  322 bits (824), Expect = 6e-86
 Identities = 145/185 (78%), Positives = 160/185 (86%)
 Frame = +2

Query: 137 QNCGCAPNLCCSRFGYCGTGPDYCGADCGEGPCNAPPSTNGVTVADIVTPEFFNGIINQA 316
           QNCGC+  LCCS+FG+CG   DYCG  C +GPC APP  NGV+VA+IVT EFFNGII+QA
Sbjct: 29  QNCGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPPPANGVSVAEIVTQEFFNGIISQA 88

Query: 317 DAGCAGKNFYSRDRFLEALNSYPQFGRVGTQDDSKREIAAFFAHVTHETGHFCYIEEIDG 496
            + CAG  FYSR  FLEAL+SY +FGRVG+ DDS+REIAAFFAHVTHETGHFCYIEEIDG
Sbjct: 89  ASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIEEIDG 148

Query: 497 ASKDYCDEANTQYPCVANKGYYGRGPIQLSWNFNYGPAGNSIGFDGLNAPETVATDPLVS 676
           ASKDYCDE  TQYPC  NKGYYGRGPIQLSWNFNYGPAG +IGFDGLNAPETVATDP++S
Sbjct: 149 ASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATDPVIS 208

Query: 677 FKTAL 691
           FKTAL
Sbjct: 209 FKTAL 213


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