BLASTX nr result

ID: Coptis23_contig00027818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027818
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELU07766.1| hypothetical protein CAPTEDRAFT_37721, partial [C...    58   7e-07
dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   8e-06

>gb|ELU07766.1| hypothetical protein CAPTEDRAFT_37721, partial [Capitella teleta]
          Length = 117

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/85 (40%), Positives = 46/85 (54%)
 Frame = +2

Query: 2   SPKHEKGSSPGHSIRASPKHEKGTSPGRGIRASLKHEKGASPGRGIWASPKHEKGTSPER 181
           SP +E  +SP + + ASP HE   SP   + ASL +E  ASP   + ASP HE   SP  
Sbjct: 4   SPANEVEASPANEVEASPVHEVEASPVHEVEASLANEVEASPANEVEASPVHEVEASPVH 63

Query: 182 GLMAGLKHEMVASFGLAILASLKHE 256
            + A L +E+ AS    + AS  +E
Sbjct: 64  KVEASLANEIEASLANEVEASPANE 88


>dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 739

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/88 (31%), Positives = 51/88 (57%)
 Frame = +3

Query: 3   VRNMKRAQVLDTA*GPVRNMKRAQVLDAA*GPV*NMKRAQVLDAAFGPVRNMKRAQVLNV 182
           V N+K+A+    + GPV N+K+A+    + GPV N+K+A+    + GP  N+K+A+    
Sbjct: 183 VNNVKKAEATAPSAGPVNNVKKAEATAPSAGPVNNVKKAEATAPSAGPANNVKKAEATAP 242

Query: 183 A*WPV*NMKWSQVLVSPF*PV*NMKRAQ 266
           +  P  N+K ++ +V    P  N+K+ +
Sbjct: 243 SAGPANNVKKAEAMVPSVKPANNVKKPE 270


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