BLASTX nr result

ID: Coptis23_contig00027816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027816
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866395.1| hypothetical protein ARALYDRAFT_496228 [Arab...    55   8e-06

>ref|XP_002866395.1| hypothetical protein ARALYDRAFT_496228 [Arabidopsis lyrata subsp.
           lyrata] gi|297312230|gb|EFH42654.1| hypothetical protein
           ARALYDRAFT_496228 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +2

Query: 170 VTTLVLRIDFHCGGCAKKIQKTIAKFKGVHNIWVDYKENLVT 295
           VTT VL+++FHC GC  KIQKTI K KGV  + +D ++NLVT
Sbjct: 135 VTTAVLKLNFHCQGCIGKIQKTITKTKGVDGLTMDKEKNLVT 176


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