BLASTX nr result

ID: Coptis23_contig00027804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027804
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]      61   8e-08

>gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]
          Length = 1923

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/79 (40%), Positives = 45/79 (56%)
 Frame = -1

Query: 248  PASLILPRLRVLEISSCWKLKYLFRIREVRNLLKLETLYINYCTNMEVILEQGNDDKDNA 69
            P S     LRVL +S C +L+YLF +  VR L KLE L ++YC NME ++  G   ++  
Sbjct: 779  PQSSSFYNLRVLVVSRCAELRYLFTVSVVRALSKLEHLRVSYCKNMEELIHTGGKGEEKI 838

Query: 68   ILPHVKISTLGTMSKQSNM 12
              P +K   L T+SK S +
Sbjct: 839  TFPKLKFLYLHTLSKLSGL 857


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