BLASTX nr result

ID: Coptis23_contig00027796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027796
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35923.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261...   100   2e-19
ref|XP_003529823.1| PREDICTED: uncharacterized protein LOC100799...    99   3e-19
ref|XP_002521366.1| conserved hypothetical protein [Ricinus comm...    95   5e-18

>emb|CBI35923.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/96 (59%), Positives = 74/96 (77%), Gaps = 3/96 (3%)
 Frame = +3

Query: 21  FKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNT---STPTGEAGVSV 191
           FKMP  KFVV GDYVR++S++SSR  SPDLD + +P+S   S S +    T  G++   +
Sbjct: 491 FKMPDWKFVVHGDYVRIKSTNSSRSGSPDLDYIGSPSSKGPSRSTSLKSETEGGDSAQPL 550

Query: 192 FCPSPDVNTKADTFIARFRAGLRMEKVNSMKEKEGI 299
           FCPSPDVNTKADTFIARFRAGL++EK+NS+KEK+ +
Sbjct: 551 FCPSPDVNTKADTFIARFRAGLKLEKINSIKEKQEV 586


>ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|222839729|gb|EEE78052.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/95 (55%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
 Frame = +3

Query: 21  FKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPTGE--AGVSVF 194
           FKMP  KFV  GDYVR+ S +SSR  SPDLDS+E  +S  + +S  +  +G   A  ++F
Sbjct: 453 FKMPAWKFVHDGDYVRVGSFNSSRSGSPDLDSIEDASSEKDQSSPVAAASGSDSAATALF 512

Query: 195 CPSPDVNTKADTFIARFRAGLRMEKVNSMKEKEGI 299
           CPSPDVNTKAD FIARFRAGL +EKVNS   +  +
Sbjct: 513 CPSPDVNTKADNFIARFRAGLTLEKVNSANRRSNL 547


>ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261010 [Vitis vinifera]
          Length = 555

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/93 (50%), Positives = 70/93 (75%)
 Frame = +3

Query: 21  FKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPTGEAGVSVFCP 200
           F+MP +K+VVRGD+VR++S+HSSR +SP+LD V+       S++ ++   G+A  + FCP
Sbjct: 455 FRMPELKYVVRGDFVRIRSTHSSRCSSPELDDVDL------SSNKSAMDGGDAIGATFCP 508

Query: 201 SPDVNTKADTFIARFRAGLRMEKVNSMKEKEGI 299
           SPDVN KADTFIAR R   R+EK+NS++E++ +
Sbjct: 509 SPDVNVKADTFIARLRGEWRLEKINSLRERKNV 541


>ref|XP_003529823.1| PREDICTED: uncharacterized protein LOC100799093 [Glycine max]
          Length = 590

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 12/105 (11%)
 Frame = +3

Query: 21  FKMPGIKFVVRGDYVRLQSSHSSRGNSPD-LD--SVETPT-SIHESNSNTSTPTGE---- 176
           FK+PG KF V+GD+VR+ S  SSR  SPD LD  SV+TPT S H+  S  ++P  +    
Sbjct: 472 FKLPGWKFRVQGDFVRVDSMGSSRSGSPDDLDEVSVDTPTTSTHDETSQVNSPFAKDSED 531

Query: 177 ----AGVSVFCPSPDVNTKADTFIARFRAGLRMEKVNSMKEKEGI 299
               +  S+FCPSPDV+TKA  FI  FRAGLRM K+NSMKE++GI
Sbjct: 532 SASVSAPSLFCPSPDVDTKAHNFIESFRAGLRMAKMNSMKERQGI 576


>ref|XP_002521366.1| conserved hypothetical protein [Ricinus communis]
           gi|223539444|gb|EEF41034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 553

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/93 (52%), Positives = 65/93 (69%)
 Frame = +3

Query: 21  FKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPTGEAGVSVFCP 200
           FKM   KF+  GDYVR+ S +SSR  SPD+DS E P+   ES+       G++ +  FCP
Sbjct: 451 FKMKPWKFISDGDYVRVASFNSSRSGSPDIDS-EDPSD-KESSPMARNKEGDSAMPSFCP 508

Query: 201 SPDVNTKADTFIARFRAGLRMEKVNSMKEKEGI 299
           SPDVNTKA+ FIARFRAGL++EK+NS+K +  +
Sbjct: 509 SPDVNTKAENFIARFRAGLKLEKINSVKGRSNL 541


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